Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3863 ATGGAAGAGACTACCAAGAGAAAACGTGATAGTATAATCAATGAATTAGTCCATGGAAAGGAGCTAGCAAATCAGCTAAGTAACCATATAATTTTATCATCCAATGAAACCAATGAATTCTTGATTGACAAGATAATTTCAACCTACCAGAAAGCACTTACTATGTTGAATGTGGGAGATGGTAAAATGAAGGATTCTCATTCTTCTTTTACAAACGAGAGTCCCAAAAGTGAGGTCATCATAGACCAGGAGTTTAACCACAATGCTCTCTTCAAGAAAAGAAAGAGCATGCCTAAATGGAAGGAGCAAGTGAAGATTTGCACAAACACAGGATTATCTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGGTATTACAGATGCACACATAGAAATGGACAAGGATGCCTAGCAACAAAGCAAGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTTACTTACAGAGGAAGACACACATGCACTCATTCTCAAGCTAAGCCTTTAAAAAGGGAATTTCCCTCAAAGTTAAAGTTAAAGATAAAGGGTTTGGAGAAAAATAAACTTCACAATGATATAAAGAATCAACTACAAACTAAAGGGACTAGTTTCACTTCCAAAGCAGAACTTGATGTTAAAAGAAAGGACTTAGAAGAAACCAAAGAGGATATCTTCCCTTGGTTTTCTTTTCCTTCTCCATCAATTGGATCAGAAAATGAGATAATGATGGAATCAAACTTTTTTAATTTGTCAGAATACCAATTAGGCTACACTGGATTATGCCAAAATGGACCAACTTCAGAATCTGATATCACTGATACAGTTTCAGCTCCAACTTCGGTCACCAATTCACCAATCCTTGATTTGGATATCTTGCTACAAAGAGGGGATTTTGACACTGATTTTCCTTTAAATACCCCTGAATATTTCTCTTCTTAA 987 0.3587 MEETTKRKRDSIINELVHGKELANQLSNHIILSSNETNEFLIDKIISTYQKALTMLNVGDGKMKDSHSSFTNESPKSEVIIDQEFNHNALFKKRKSMPKWKEQVKICTNTGLSEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHSQAKPLKREFPSKLKLKIKGLEKNKLHNDIKNQLQTKGTSFTSKAELDVKRKDLEETKEDIFPWFSFPSPSIGSENEIMMESNFFNLSEYQLGYTGLCQNGPTSESDITDTVSAPTSVTNSPILDLDILLQRGDFDTDFPLNTPEYFSS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3863 328 Gene3D WRKY domain 102 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3863 328 SUPERFAMILY WRKY DNA-binding domain 115 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3863 328 ProSiteProfiles WRKY domain profile. 112 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3863 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 325 IPR044810 GO:0003700
Mtr7g3863 328 Pfam WRKY DNA -binding domain 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3863 328 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 325 - -
Mtr7g3863 328 SMART WRKY_cls 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3863 Mtr-Chr7 55450509 55452535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3863 3 319 WRKY Transcription Factor Family AT4G11070 37.072 1.14e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr7g3863 WRKY 7.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3863 - - mtr:MTR_7g117200 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3863 7 55450509 55452535 Mtr7g3863 7 55450509 55452535 ECH
Mtr8g0826 8 10234530 10237739 Mtr7g3863 7 55450509 55452535 ECH
Mtr8g3539 8 45984819 45986665 Mtr7g3863 7 55450509 55452535 ECH
Mtr7g3863 7 55450509 55452535 Mtr8g0826 8 10234530 10237739 PCT