Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3851 ATGAATGATGAGTTTCGAATTGGAATGCATATTCTTGCTGTTGATGATGACAGAACTTGTCTCAAGATTTTGGGGAGACTTCTCGAAAGCTGTCAATACCATGTAACCACTGCTCCAAGTGCACGAATGGCACTGAATTTGTTGAGAGAAAACAAAAACAAATATGACTTAGTAATGAGTAACGTTCATATGCCAGACATGGATGGATTTAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACCTACCTGTCATAATGTTTTCTGAAAATGATGATCCTAAGCTGGTGATGAAAGCAATTGATGTTGGTGCTTGTGATTATCTGCTGAAACCTGTTCAACTGAAAGAGGTGAAGATGATTTGGCAACATGTAATCAGAAAGAAGAAAACTAGCAAAAGAAGCAATGACGATCCTCGGTTTAAATGGTCCCGTGACTTACACCACAAGTTTGTTGTCGCGGTTAATCAATTTGGCGTTGAAAAGGCTAGACCAAAAAAGATTCTTAACTTGATGAATATTGAAAATCTTACAAAGGAACATGTGGCCAGCCATCTCCAGGTATTTTTCTTTATCTCTTATGCTTTAGATTTTTAA 594 0.3771 MNDEFRIGMHILAVDDDRTCLKILGRLLESCQYHVTTAPSARMALNLLRENKNKYDLVMSNVHMPDMDGFKLLELVGLEMDLPVIMFSENDDPKLVMKAIDVGACDYLLKPVQLKEVKMIWQHVIRKKKTSKRSNDDPRFKWSRDLHHKFVVAVNQFGVEKARPKKILNLMNIENLTKEHVASHLQVFFFISYALDF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3851 197 CDD REC_typeB_ARR-like 11 125 - -
Mtr7g3851 197 PANTHER TWO-COMPONENT RESPONSE REGULATOR 137 186 - -
Mtr7g3851 197 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 134 - -
Mtr7g3851 197 SMART REC_2 9 121 IPR001789 GO:0000160
Mtr7g3851 197 Pfam Response regulator receiver domain 11 117 IPR001789 GO:0000160
Mtr7g3851 197 SUPERFAMILY CheY-like 8 133 IPR011006 -
Mtr7g3851 197 ProSiteProfiles Response regulatory domain profile. 10 125 IPR001789 GO:0000160
Mtr7g3851 197 Gene3D - 141 190 - -
Mtr7g3851 197 PANTHER TWO-COMPONENT RESPONSE REGULATOR 137 186 IPR045279 GO:0009736
Mtr7g3851 197 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 134 IPR045279 GO:0009736
Mtr7g3851 197 Pfam Myb-like DNA-binding domain 141 187 IPR001005 -
Mtr7g3851 197 Gene3D - 9 140 - -
Mtr7g3851 197 SUPERFAMILY Homeodomain-like 137 190 IPR009057 -
Mtr7g3851 197 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 138 190 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3851 Mtr-Chr7 55349570 55351438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3851 3 188 Response Regulator Gene Family AT2G25180 52.542 6.28e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mtr7g3851 Response_reg 3.7e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3851 - K14491 cam:101500109 265.388