Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3849 ATGGCTTCGAGATTCTGGACACAGGGTAATAGCGATAGTGACGATGACGAACCCACTGATATTGATGAACCTAGTAGCGATACTGAACCCGTTGATGAACCCACAAACAATACAGCCAATAGATACATTGCTGGTATTCATCCTGATGACAGTGACGATGATGATGGCCAAAAGCGTGTTGTTAAGTCTGCTAAAGATAAGCGTTTTGATGAGATGGCTTCCACTGTCGATCAGATCAAGAATGCCATCAAGATCAATGACTGGGTCAGCTTGCAAGAGACCTTTGATAAGATCAACAAACAGCTCGACAAAGTTATGCGTGTTATAGAGTCCCAAAAGATCCCCAATCTCTACATCAAGGCTCTTGTAATGCTTGAAGATTTCCTCGCTCAGGCTTCTTCTAATAAGGATGCCAAAAAGAAGATGAGTCCCACCAATGCCAAAGCCTTCAACTCAATGAAGCAAAAATTGAAGAAGAACAATAAGCAATACGAGGACTTGATTATCAAATTCAGGGAGACTCCTCAGAGTGAGGAGGAAAAGTTTGAAGACGATGAGGACTCTGACCAATATGGGTCCGATGATGATGAGATCATTGAACCTGATCAGCTCAAGAAGCCGGAGCCCGTATCGGATTCTGAAACTTCTGAGCTTGGTAATGACAGGCCTGGTGATGATGACGATGCCCCTTGGGATCAAAAGCTTAGAAAGAAAGATAGGCTTTTGGAGAAAATGTTCATGAAAAAGCCTAGTGAGATCACATGGGATACTGTTAACAACAAGTTCAAAGAGATTCTGGAAGCCAGGGGCAGGAAGGGAACTGGAAGGTTTGAACAGGTTGAGCAGTTTACCTTCCTAACAAAAGTTGCTAAAACACCTGCACAGAAGCTGCAAATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCTGGCCTCAGTGGGCATATGCCCATAAATGTGTGGAAAAAGTGCGTGCAGAATATGCTGGTCATTCTTGATATTCTCGTGCAGCACCCAAACATAAAGGTTGATGATTCTGTGGAACTAGATGAGAATGAATCTAAGAAAGGGGATGACTATGACGGACCCATTCATGTCTGGGGCAACTTAGTTGCTTTCTTAGAAAAAATAGATGCCGAATTTTTCAAGAGCTTGCAGTGCATAGATCCCCACACACGTGAATATGTTGAGAGACTCAGGGATGAGCCTCTGTTTGTTGTTCTTGCACAGAATGTCCAGGAATATCTTGAAAGCATCGGAGATTTCAAAGCTTCTTCTAAGGTGGCCTTGAAGAGGGTTGAACTCATTTACTACAAACCACATGAGGTTTATGAAGCAACGAGAAAATTGGCTGAGCTGACGGTAGATGGAGATAACGGAGAGGAGGTGAGTGAGGAGTCAAAAGGTTTTGTGGATACAAGAATCATTGCTCCATTTGTTGTTACCCCAGAGCTTGTGGCCCGGAAACCCACTTTCCCGGAGAATAGCAGGACCTTAATGGATGTGTTGGTATCACTAATATACAAATACGGAGATGAGCGCACTAAAGCACGCGCAATGCTTTGTGATATATATCACCATGCTCTTCTAGATGAGTTTGCAGTTGCCCGTGATCTGTTGCTTATGAGTCATTTGCAAGAAAATGTTCACCACATGGACATTTCGACACAGATACTCTTTAACAGGGCTATGTCACAGTTAGGTCTATGTGCTTTTCGTGTTGGCCTGGTTTCTGAAGCACATGGCTGTTTGTCTGAACTTTATTCTGGTGGACGGGTGAAAGAACTGCTTGCACAAGGAGTTTCACAGAACCGTTATCATGAAAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCATATAAATCTTGAGCTCCTGGAATCAGTGCATCTTACATCTGCTATGCTGCTGGAAGTTCCCAACATGGCAGCCAATGTTCATGATGCTAAGCGTAAGATCATCAGTAAGAATTTCCGCCGCTTGCTTGAGGTCAGTGAGAAACAAACATTCACCGGTCCTCCTGAAACTGTCAGGGATCATGTTATGGCTGCCACAAGGGTTCTTATTAATGGCGATTTCCAGAAGGCCTTTGACATTATTGCATCTCTTGAGGTGTGGAAATTTGTGAAAAATCGTGACACCGTGCTAGAAATGCTGAAGGACAAAATCAAGGAGGAGGCGCTTAGGACATACCTATTTACCTTCTCTTCATCATATGATTCTTTGAGCGTGGATCAGCTCACAAATTTTTTCGATCTCTCTCTTCCTCGTGCTCATAGTATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGATCAGCCAACTGGGTGCATTATTTTCAGAAATGTTGAACTCTCAAGGGTGCAGGCTTTGGCATTCCAGTTGACTGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCTTCAGAAGCAAGATTAGGTGGTGGTGGGTTGGATCTGCCTCCAAGGCGGAGAGATGGGCAGGATTATGCCGCTGCAGCTGCTGGCGGTGGTGGTGGAACGTCTTCAGGTGGCAGGTGGCAAGACTTGTCCTATTCTCAAACAAGACAAGGCAGTGGACGCGCAGGATATGGTGGAAGGGCATTGTCATTCAATCAAGCTGGTGGGAGTGGCGGCTATTCTAGAGGACGGGGAATGGGTGGAGGCGGCTATCAGAATTCAAGTAGGACTCAAGGGGGTTCAGCGCTGAGGGGACCCCATGGAGATGTATCTACCCGCATGGTTAGCCTTAGGGGAGTTCGTGCTTAA 2811 0.4479 MASRFWTQGNSDSDDDEPTDIDEPSSDTEPVDEPTNNTANRYIAGIHPDDSDDDDGQKRVVKSAKDKRFDEMASTVDQIKNAIKINDWVSLQETFDKINKQLDKVMRVIESQKIPNLYIKALVMLEDFLAQASSNKDAKKKMSPTNAKAFNSMKQKLKKNNKQYEDLIIKFRETPQSEEEKFEDDEDSDQYGSDDDEIIEPDQLKKPEPVSDSETSELGNDRPGDDDDAPWDQKLRKKDRLLEKMFMKKPSEITWDTVNNKFKEILEARGRKGTGRFEQVEQFTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENESKKGDDYDGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPLFVVLAQNVQEYLESIGDFKASSKVALKRVELIYYKPHEVYEATRKLAELTVDGDNGEEVSEESKGFVDTRIIAPFVVTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLLLMSHLQENVHHMDISTQILFNRAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQGVSQNRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKIISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLEVWKFVKNRDTVLEMLKDKIKEEALRTYLFTFSSSYDSLSVDQLTNFFDLSLPRAHSIVSRMMINEELHASWDQPTGCIIFRNVELSRVQALAFQLTEKLSILAESNERASEARLGGGGLDLPPRRRDGQDYAAAAAGGGGGTSSGGRWQDLSYSQTRQGSGRAGYGGRALSFNQAGGSGGYSRGRGMGGGGYQNSSRTQGGSALRGPHGDVSTRMVSLRGVRA* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3849 936 MobiDBLite consensus disorder prediction 134 156 - -
Mtr7g3849 936 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 49 658 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mtr7g3849 936 Pfam PCI domain 666 794 IPR000717 -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 198 212 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 179 197 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 1 60 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 825 936 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 175 233 - -
Mtr7g3849 936 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 877 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mtr7g3849 936 SUPERFAMILY "Winged helix" DNA-binding domain 722 796 IPR036390 -
Mtr7g3849 936 Coils Coil 147 174 - -
Mtr7g3849 936 SMART PINT_4 727 815 IPR000717 -
Mtr7g3849 936 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 935 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mtr7g3849 936 MobiDBLite consensus disorder prediction 858 874 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 218 233 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 136 156 - -
Mtr7g3849 936 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 1 935 - -
Mtr7g3849 936 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 727 815 - -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 13 29 - -
Mtr7g3849 936 ProSiteProfiles PCI domain profile. 626 798 IPR000717 -
Mtr7g3849 936 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3849 Mtr-Chr7 55326011 55330300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3849 1 936 Eukaryotic Initiation Factors Gene Family AT3G56150 65.532 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3849 K03252 - gmx:100779751 1396.33