Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3844 ATGGGAAATAGCGATGAAGAGAAATCTACCAAGACTGAAAAACCTTCTTCACCTGTAACAGTGGATCAGACCAACCAGACGAATGTTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGACCAAGAGTTGCCATGCCACCTTACTACAACTCACCTGTGGCTTCTGGTCACACTCCTCACCCATATATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGACATCCTTATGCAGCAATGTATCCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGTCCACATCCACATAGTCAAGGAATTTCATCTTCACCTGCTACTGGAACTCCTTTAAGCATAGAGACACCTCCCAAATCATCTGGAAATACTGATCAGGGTCTGATGAAGAAATTGAAAGGGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATGCTGAGAGTGCTGAGCCTGGAGCTGAAAGCAGGCAATCACAGAGTGTGAATACTGAGGGTTCGAGTGATGGAAGTGACGGAAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGCAGATGGAGAAGGGAAAACAAATACACAAGGTAGTCAAATTTCCAAAGAAATTGCAGCTTCTGATAAGATGATGGCAGTAGCCCCTGCTGGTGTCACAGGTCAACTAGTTGGACCTGTAGCTTCTTCAGCGATGACCACCGCACTGGAGCTGAGAAATTCTTCTAGTGTTCATTCTAAAACAAATCCCACAAGTACCCCACAACCTTCTGCTGTATTGCCTCCCGAGGCTTGGATACAGAATGAGCGTGAACTGAAGCGTGAGAGGAGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAGGCTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAGTGCGTCACTTAGATCAGAAATAAACCGACTTGCTGAGAATTCTGAAAGACTGAGGATGGAAAATGCTGCATTAAAGGAAAAATTTAAAATTGCTAAACTGGGACAACCGAAAGAGATAATTTTGACCAACATTGACAGCCAGAGGACCACACCTGTAAGTACAGAAAACTTATTATCAAGAGTTAATAACAATTCGGGTTCTAATGATAGAACTGTGGAGGATGAGAATGGTTATTGTGACAACAAACCAAATTCTGGTGCGAAGTTGCACCAACTATTGGATGCAAGTCCTAGAGCTGATGCTGTGGCTGCTGGTTGA 1281 0.4489 MGNSDEEKSTKTEKPSSPVTVDQTNQTNVHVYPDWAAMQAYYGPRVAMPPYYNSPVASGHTPHPYMWGPPQPMMPPYGHPYAAMYPHGGVYTHPAVPIGPHPHSQGISSSPATGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAEPGAESRQSQSVNTEGSSDGSDGNTSGANQTRRKRSREGTPTTADGEGKTNTQGSQISKEIAASDKMMAVAPAGVTGQLVGPVASSAMTTALELRNSSSVHSKTNPTSTPQPSAVLPPEAWIQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLRSEINRLAENSERLRMENAALKEKFKIAKLGQPKEIILTNIDSQRTTPVSTENLLSRVNNNSGSNDRTVEDENGYCDNKPNSGAKLHQLLDASPRADAVAAG* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3844 426 MobiDBLite consensus disorder prediction 249 265 - -
Mtr7g3844 426 MobiDBLite consensus disorder prediction 158 185 - -
Mtr7g3844 426 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Mtr7g3844 426 MobiDBLite consensus disorder prediction 402 426 - -
Mtr7g3844 426 MobiDBLite consensus disorder prediction 249 304 - -
Mtr7g3844 426 MobiDBLite consensus disorder prediction 278 304 - -
Mtr7g3844 426 PANTHER G-BOX-BINDING FACTOR 3 1 426 - -
Mtr7g3844 426 MobiDBLite consensus disorder prediction 96 216 - -
Mtr7g3844 426 Pfam Disordered region downstream of MFMR 130 261 - -
Mtr7g3844 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Mtr7g3844 426 Pfam bZIP transcription factor 280 342 IPR004827 GO:0003700|GO:0006355
Mtr7g3844 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Mtr7g3844 426 MobiDBLite consensus disorder prediction 103 132 - -
Mtr7g3844 426 MobiDBLite consensus disorder prediction 1 27 - -
Mtr7g3844 426 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Mtr7g3844 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 426 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mtr7g3844 426 SUPERFAMILY Leucine zipper domain 283 339 IPR046347 GO:0003700|GO:0006355
Mtr7g3844 426 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Mtr7g3844 426 Gene3D - 283 335 - -
Mtr7g3844 426 MobiDBLite consensus disorder prediction 198 215 - -
Mtr7g3844 426 Coils Coil 293 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3844 Mtr-Chr7 55290006 55294806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3844 1 426 bZIP Transcription Factor Family AT2G46270 52.315 1.10e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr7g3844 MFMR_assoc 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3844 K09060 - gmx:100781875 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3844 7 55290006 55294806 Mtr7g3844 7 55290006 55294806 ECH