Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3832 ATGGCTCGCCACCTTGTCTTTGCATTTATCATTTTTGCTATTTTTATACACTCTCTATCTTCTGCACCCAATGACACACAAGGTACATGTTTATTGGATTTCAATGCATACCAAAATGAATATATGCCTTTTGGTGAATGTGGGGGTGCAAAAGAGGATATAACCAAATGGGGCAGTGGCAGTGATGGTTTCCCAACTACTCTCTGCTGCAGAAATGCTCTGACCATTTTGTCAGATGCCATGGCCTCACAAGTCCGTAACACAAAAGGACAAATGTTCCTTTCTCAAGAACAATGGCAAAGTTGCAACCAATCATTTCATCCACAACCAGGGATGTCACTGTCTTCATGTGGCTTTGATAACTTTTACTTTGGTAGCTCTCAATGCTCCAATTTATCTTTGCTAACTGTTCAAGGCTCGCAAAAGTACTCAGATGCATTGAACCAATGCAGCCACTTCGACCTTTCGTTTGATGAGTCGTGTGCGGATTGTACAAGTGCAATATTGAATCTGAGAGATAATTTATATGACACAATGAGCAATGATACTGAGAGAGCCATTTGTGGAGTAGCAGCTCTTGTTGCTGTTGCATTTGAACAACCAAATGATCCTTTCCTTGCTGACAAATTCTTGCGCTGCTTGCCACCTCCAGCAGTACATAACAAGAAATCATCAATGAAGAAACTTGTGTTGGCAATGTTGGTGATAGCTATCTTAGCATTATTGATTATTGCTTTTCTGGTAAAATGTGTATCAAAGAAGAAGCCTGTTAAGAAGCACGTCCAGTTGAAACAGATAGCTACTTGGTCTGGACTTTACTGGTTCACAAAAACTGAAATTGAAAATGCCATGAATTTTGAAAATGAAAAGATAAACCTTGGACGCGGGAGTGCGGGTGAAGTGTTTAGAGGTGTTTTGCCAAGTGGTCAAGTTGTGGCCATCAAGCATTTGACAAAGAGTAACACCTCTAGTTCTGATTCTTTCACTCGAGAACTTGCTGGTCTTTCTAGACTTCGTCATCCAAACCTTGTTTGCTTGTTTGGCTGTTGCATGGAAGATGGCGAAAGATATCTTGTCTACGAGTTCTGTGCCAATGGAAATCTTGCTCAACATCTCTTGAGAAGAGACAGCCATTTGACATGGGAAGCAAGAGTGAAGATTTTGAGAGAATGTTCATTTGCGCTTAAGTATCTCCATCATCATATAGAGGGTTGTGTTGTCCATAGAGATATCAAGCTTACAAACATTCTTTTGACTGAGAAATATGAAGCCAAACTGTCGGATTTTGGATTGTCAAGGATGATGGGCATGGAAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACTATAGGTTACATGGATCCAGAGTACATGAGTAATGCCAAGTTAACTTGTGCCAGTGATGTATATAGTTTTGGAATTGTTGCTTTGCAAATTCTGTCAGGACAGAAAGTCATAGAGTTGGATCTTGATGCAAGAGATCAGCTCACCAGAAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCATTGTCGGATTTTGTAGACTCGCGACTAAAGGGACAAGTTGATAAGGAGGATTTTGGATCTATTTTACAGATTGCAGTACTTTGTGTTGCCAAATCAAGCACGGGTCGCCCACCAATTGAGGTTGTTTTTGACGAATTGGACAAAGTCTATAGGGACCTTGATTCACGCAAGAAGGCAACCCCAACACCATCAACAACATCAACATCAACATCAACATCTAGCTCTAACTGA 1758 0.4084 MARHLVFAFIIFAIFIHSLSSAPNDTQGTCLLDFNAYQNEYMPFGECGGAKEDITKWGSGSDGFPTTLCCRNALTILSDAMASQVRNTKGQMFLSQEQWQSCNQSFHPQPGMSLSSCGFDNFYFGSSQCSNLSLLTVQGSQKYSDALNQCSHFDLSFDESCADCTSAILNLRDNLYDTMSNDTERAICGVAALVAVAFEQPNDPFLADKFLRCLPPPAVHNKKSSMKKLVLAMLVIAILALLIIAFLVKCVSKKKPVKKHVQLKQIATWSGLYWFTKTEIENAMNFENEKINLGRGSAGEVFRGVLPSGQVVAIKHLTKSNTSSSDSFTRELAGLSRLRHPNLVCLFGCCMEDGERYLVYEFCANGNLAQHLLRRDSHLTWEARVKILRECSFALKYLHHHIEGCVVHRDIKLTNILLTEKYEAKLSDFGLSRMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFVDSRLKGQVDKEDFGSILQIAVLCVAKSSTGRPPIEVVFDELDKVYRDLDSRKKATPTPSTTSTSTSTSSSN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3832 585 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 42 564 - -
Mtr7g3832 585 Pfam Protein kinase domain 291 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3832 585 Pfam SPARK 25 181 IPR043891 -
Mtr7g3832 585 PANTHER OS01G0253100 PROTEIN 42 564 IPR045271 GO:0004714|GO:0006468
Mtr7g3832 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Mtr7g3832 585 MobiDBLite consensus disorder prediction 563 585 - -
Mtr7g3832 585 Gene3D Phosphorylase Kinase; domain 1 257 362 - -
Mtr7g3832 585 ProSiteProfiles Protein kinase domain profile. 287 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3832 585 Gene3D Transferase(Phosphotransferase) domain 1 363 579 - -
Mtr7g3832 585 SMART serkin_6 286 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3832 585 SUPERFAMILY Protein kinase-like (PK-like) 292 578 IPR011009 -
Mtr7g3832 585 MobiDBLite consensus disorder prediction 568 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3832 Mtr-Chr7 55191590 55196015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3832 275 569 Receptor kinase-like Gene Family AT1G16260 37.037 2.35e-57 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Mtr7g3832 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3832 - - mtr:MTR_7g116650 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3832 7 55191590 55196015 Mtr8g0899 8 11086610 11090217 PCT