Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3822 ATGACTCTCAATTCTCGTTCAAATAATGATTTCACACCTACAGATGATGAACTTATCCGATCATTCCTCTACAATAGAATTCACAATAATCCAGTGCCCAACTATATCACCATTCTCGACTATGAATTGTTTGGTATCGTAAAGAATCCTTGGGAGATTTGGGAAGAGTTTGCACCTTCTCACTCATATTGTGGAAAAGACCTATATTTCTTCACTACCTTAAAGAAGAAATCTGCCACTAGTAAACGCTTGATTCGTACTATTGGAAGTGGTACGTGGGAAGGTGAAGACACCGGAAAAGGAATAGTTGCCAAAGAGACTAACAAAGTCTTAGGTATAAAAAAACGTTTTCGCTTTGGGAAGAGTAACACTTTCCATGACGGTGCATGGATCTTGCATGAATATAACCTTGACAAATCTTTGATTAACAATACTTTGGCCAACAACTATGTTCTGTGCAGATTTAGAAAGAATTTGAAAATCAATCAACACCAATCCAATTCTCACTTAATGAATAGCATTGGCATACCAAGAATTAATGTTGAACTAGATGGGCAAGGAAAGACGGTTGTTCCCGGACATGCGGAAAACGACATATCTGAGAACAATAATGTTTGGTTGGAGAAAAATATTGACCAAAATTCAAGAAATCAACTTGATGGTGGAAATATCAAGACCGATGTGGTTAAAAGTCTCAAACCAATTGATTCCAAATTTAACAAAGAAGATGATGATCACATTAGGAACGGAGAAGAAGATGGTGGTGTCATTATGTCTTGGCCTGAGCTTTTTTCGCAGGAACTGAGAGAGAAGAATGAAGGAAGCTTAATCGAAGAAGAGGAAGTTCAAATGCTTCCCAATAATTTTTATAAGGAACTGTTGTTGGAAAGTATTAAGTTTGAGTAA 906 0.3675 MTLNSRSNNDFTPTDDELIRSFLYNRIHNNPVPNYITILDYELFGIVKNPWEIWEEFAPSHSYCGKDLYFFTTLKKKSATSKRLIRTIGSGTWEGEDTGKGIVAKETNKVLGIKKRFRFGKSNTFHDGAWILHEYNLDKSLINNTLANNYVLCRFRKNLKINQHQSNSHLMNSIGIPRINVELDGQGKTVVPGHAENDISENNNVWLEKNIDQNSRNQLDGGNIKTDVVKSLKPIDSKFNKEDDDHIRNGEEDGGVIMSWPELFSQELREKNEGSLIEEEEVQMLPNNFYKELLLESIKFE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3822 301 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Mtr7g3822 301 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 10 279 - -
Mtr7g3822 301 SUPERFAMILY NAC domain 10 156 IPR036093 GO:0003677|GO:0006355
Mtr7g3822 301 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Mtr7g3822 301 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
Mtr7g3822 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3822 Mtr-Chr7 55083830 55087830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3822 11 154 NAC Transcription Factor Family AT5G13180 31.293 8.19e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g3822 NAM 3.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3822 - - mtr:MTR_7g116460 418.313