Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3819 ATGGAAGAAAAAATAAAGTTTGAACAAACCCTTGAGAAGAAACAGTTCGAAGTACAGAAAGAAATAGGCAAGGGATCCTACGGCACAATTTTCCAATGCTATCACACCATTAAAAACCAAACCTACGCCGTCAAAGTAATTAACAAACATCCACTAGCCAATCCAACAGACATTAAATGTTTCGTCAAAGAATCCAAAATCATGAAACACCTCTCTCCACACCCGAACATTCTTAAAATATTTGATTCCTTCGAAGACACCGATTTCTCCTTCATCGTTCTTGAACTCTGTCAGCCCAATTATGACCTCTTGGAACGCATCCTCAAAGGTCCTGTATCGGAACAACAAGCTGCTACGTACATGAAGAACCTTCTAGAAGCAATAGTGCACTGCCATAAGCATGGAATAGCACACAAAGACATAAAACCAGATAATATTTTGTTTGATTTTAATGGAAACATTAAACTTGCTGATTTTGGTAGTGCAGAGTGGTTATTTGAGGGTGGAAAGAAAAGGAACGAATGTGTTGGAACATTTCATTATATGGCACCTGAAGTAATTTTGGGAAAAGAACATGATAGTACCAAAGTTGATGTTTGGAGTTGTGGTGTTACTCTTTATGTAATGTTGTGTGCAATAGAGCCCTTTCATGGAGAAACTCCTTGTGATACTTTTAAGGCTATCTTGAAGACAAATTTGAGGTTTCCAATGACAACATTTATATCTATGTCGACACCTGCTACTGATCTTATCAAGAAGATGATTTGTAGGGATCCCTCTAAAAGAATATCAGCTGAGGAAGCTTTGATGCATCCGTGGATCTTGAAAGGTGGAGTGATTGGTGACAATATTCAGCCACTAAAGCGCGGTGCAAGAAAATTTCTTTAG 888 0.3818 MEEKIKFEQTLEKKQFEVQKEIGKGSYGTIFQCYHTIKNQTYAVKVINKHPLANPTDIKCFVKESKIMKHLSPHPNILKIFDSFEDTDFSFIVLELCQPNYDLLERILKGPVSEQQAATYMKNLLEAIVHCHKHGIAHKDIKPDNILFDFNGNIKLADFGSAEWLFEGGKKRNECVGTFHYMAPEVILGKEHDSTKVDVWSCGVTLYVMLCAIEPFHGETPCDTFKAILKTNLRFPMTTFISMSTPATDLIKKMICRDPSKRISAEEALMHPWILKGGVIGDNIQPLKRGARKFL* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3819 295 SUPERFAMILY Protein kinase-like (PK-like) 10 276 IPR011009 -
Mtr7g3819 295 Pfam Protein kinase domain 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3819 295 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 9 279 - -
Mtr7g3819 295 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3819 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mtr7g3819 295 PIRSF ILK 1 270 - -
Mtr7g3819 295 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 279 - -
Mtr7g3819 295 Gene3D Transferase(Phosphotransferase) domain 1 7 288 - -
Mtr7g3819 295 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3819 295 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mtr7g3819 295 CDD STKc_CAMK 15 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3819 Mtr-Chr7 55032125 55033182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3819 16 274 EF-hand Containing Proteins AT5G19450 39.544 1.01e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr7g3819 Pkinase 4.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3819 - K08794 mtr:MTR_7g116390 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2828 1 39432607 39433895 Mtr7g3819 7 55032125 55033182 ECH
Mtr7g3819 7 55032125 55033182 Mtr7g3819 7 55032125 55033182 ECH