Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3815 ATGGATAAAGGGTTTTCTTCTTCTTTGTTGTTATTGCTATTGTTGATGATTAGTTCTCTTGTGATATCTGTTTATGGGATTGATGGTGAATATGTACATTGCAACTGTGATGATGATGATCATGGGATTTGGAGTGTACAAAGTATTTTGGTTTGTCAAAAAGTCAGTGACTTTTTCATTGCTATTGCATATTTTTCAATACCCCTTGAGCTTCTTTACTTTGTTAGCTACTCCAATGTTCCATTTAAATTGGTATTTCTCCAGTTTGTTGCCTTTATAGTTCTATGTGGTTTGACCCATTTACTCAATGCCTATACTTACTATGGCCCTCATTCCTTTCAATTGTTTCTATCTCTCACTGTTGCTAAATTCCTCACTGCCCTTGTTTCATGTGCCACTGCAATTACTTTTCCCACCTTGATTCCTCTTCTTTTGAAAATCAAGGTGAGGGAGTTTTTCTTGAAGCAGAATGTGTTGGAATTGGGACAGGAGGTTGGGATTATGAAGAAACAGAAGGAGGCTAGTTGGCATGTTAGGATGTTGACCCGCGAGATTAGGAAGTCTTTGGATAAGCATACAATTTTGTATACCACACTTGTTGAGCTTTCCAAGGCCTTGGAGTTGCATAATTGTGCGGTTTGGATGCCTGATGAGGATAGAAGGGTGATGCATTTGACTCATGAGTTGAAGCCCAATCCGGCGAAGAGTTTTCATAGTTCCATTTCTGTAAATGATTTGGATGTGTTAGAGATAAGAAAGAGCAAGGGGGTGACGATTTTGAGGCCTGATTCTGCACTCGGAGCTGCCAGTAGTGGTGAATCTGGGGACTCGGGTGCTGTAGCAGCCACTCGTATGCCGATACTTCATGTTTCGAATTTCAAAGGAGGGACACCGGAGTTTGTTGAGACATCTTATGCTATACTAGTTTTGGTTCTTCCGAAATCGAACTCAAGGGCTTGGACCCACCATGAGATGGAGATAGTGGAGGTAGTTGCTGACCAGGTTGCTGTGGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGGAACTGAAAGAGCAAAACCGGGCGTTGCAACAGGCACAAAAGCATGCAATGATGGCCCGCCAGGCAAGGAGCTCATTTGAGAAAGTGATGAGCCATGGAATGAGGAGACCGTTGCATTCAATCCTGGGCTTGCTTTCAATGTTTCAAGAGGATAATATAAGATCTGAACAGAAGATTGTGGTTGATACAATATTGAAAATTAGCAATTCGCTCTCGCGTTTGATAAATGATGTAATGGAAATTTCAGCCAACGACAAAGGAAGTTTCCAGTTAGAGTTGAAACATTTCCATCTACATTCCATGCTGAGGGAAGCTTCATGCATTGCCAAGTGTTTGTGTGTGTATAAAGGCTTTGGTCTTGAAATTGACGTGCAGAGATCCTTGCCTGATATGGTAATAGGTGATGAAGCAAGGTCTTTTCAGTTAATTTTGCATATGATTGGCTATTTATTGAACTTATATGATAGAGGGACTCTCATTTTCCGAGTTTCTTTTGAAAGTGATACCGCAGATAAGGATGATAGAAGTTCTGGAATATTGAGATCAAGCATGCAAAATGATAATGTGCATATAAAATTTAATTTCCAGATAACTGGTACTAGTTCCCATTCAGATGGACCAATTTTAAATAGTAGTTGTGCTAGTAGGATGCCCCACAGTAATGAACCTAAGGAGGGCCTAAGTTTCAGCATTTGCAAAACACTGGTGCAGATGATGGAAGGTAATATCTGGATATCACCAAACTCTCTGGGTTTGGCACAAGGGATGACACTTCTTCTCAAGTTTCAATTAGGATCATCGCATGGAAGATTCGTTCTTGCTAACAAAGATTTTTCAAACCAACAGTTTAGAGGTCTTAACGTTATTTTAGCTGATGATGATAATGTAAACAGGACTGTAACTAAGAAGCTGCTTGAGAAGCTGGGTTGTCAAGTAACCGCCGTTTCATCGGGTTTTGATTGTTTGGCTGCTATAACTGCCTCCAGTATACCATTCAAAATCATCCTATTGGATCTTCAAATGCCTGAAATGGACGGTTTTGAAGTTGCAAGGAAGATTCGGAAGTTCCAAAGCCGAAATTGGCCCTTGATTATTGCTCTTACAGCAAGTGCAGAAGAACGCATAAAGGAGAGATGCCTGCAGGTGGGAATGAATGGATTGATTCGAAAACCTATCCTTCTTCACGAGATAGCTAATGAAATTAGAACAGTCCTGCTACGTGCAGGTGAAAAGTTCTAA 2298 0.4073 MDKGFSSSLLLLLLLMISSLVISVYGIDGEYVHCNCDDDDHGIWSVQSILVCQKVSDFFIAIAYFSIPLELLYFVSYSNVPFKLVFLQFVAFIVLCGLTHLLNAYTYYGPHSFQLFLSLTVAKFLTALVSCATAITFPTLIPLLLKIKVREFFLKQNVLELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALELHNCAVWMPDEDRRVMHLTHELKPNPAKSFHSSISVNDLDVLEIRKSKGVTILRPDSALGAASSGESGDSGAVAATRMPILHVSNFKGGTPEFVETSYAILVLVLPKSNSRAWTHHEMEIVEVVADQVAVALSHASVLEESQLMRQELKEQNRALQQAQKHAMMARQARSSFEKVMSHGMRRPLHSILGLLSMFQEDNIRSEQKIVVDTILKISNSLSRLINDVMEISANDKGSFQLELKHFHLHSMLREASCIAKCLCVYKGFGLEIDVQRSLPDMVIGDEARSFQLILHMIGYLLNLYDRGTLIFRVSFESDTADKDDRSSGILRSSMQNDNVHIKFNFQITGTSSHSDGPILNSSCASRMPHSNEPKEGLSFSICKTLVQMMEGNIWISPNSLGLAQGMTLLLKFQLGSSHGRFVLANKDFSNQQFRGLNVILADDDNVNRTVTKKLLEKLGCQVTAVSSGFDCLAAITASSIPFKIILLDLQMPEMDGFEVARKIRKFQSRNWPLIIALTASAEERIKERCLQVGMNGLIRKPILLHEIANEIRTVLLRAGEKF* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3815 765 Pfam His Kinase A (phospho-acceptor) domain 376 439 IPR003661 GO:0000155|GO:0007165
Mtr7g3815 765 Gene3D - 439 620 IPR036890 -
Mtr7g3815 765 SMART REC_2 639 754 IPR001789 GO:0000160
Mtr7g3815 765 Pfam GAF domain 192 339 IPR003018 GO:0005515
Mtr7g3815 765 PANTHER ETHYLENE RECEPTOR 10 758 - -
Mtr7g3815 765 SUPERFAMILY GAF domain-like 193 342 - -
Mtr7g3815 765 ProSiteProfiles Histidine kinase domain profile. 382 619 IPR005467 -
Mtr7g3815 765 Coils Coil 345 375 - -
Mtr7g3815 765 PANTHER TWO-COMPONENT HISTIDINE KINASE 10 758 - -
Mtr7g3815 765 SMART HisKA_10 375 440 IPR003661 GO:0000155|GO:0007165
Mtr7g3815 765 SMART gaf_1 190 349 IPR003018 GO:0005515
Mtr7g3815 765 Pfam Response regulator receiver domain 641 754 IPR001789 GO:0000160
Mtr7g3815 765 Gene3D - 625 758 - -
Mtr7g3815 765 CDD HATPase_ETR2_ERS2-EIN4-like 481 613 - -
Mtr7g3815 765 PIRSF Ethylen_sen_hybr_HK 7 764 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mtr7g3815 765 ProSiteProfiles Response regulatory domain profile. 640 758 IPR001789 GO:0000160
Mtr7g3815 765 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 360 440 IPR036097 GO:0000155|GO:0007165
Mtr7g3815 765 CDD HisKA 374 435 IPR003661 GO:0000155|GO:0007165
Mtr7g3815 765 CDD REC_ETR-like 639 754 - -
Mtr7g3815 765 SUPERFAMILY CheY-like 635 758 IPR011006 -
Mtr7g3815 765 Gene3D - 180 338 IPR029016 -
Mtr7g3815 765 Gene3D - 339 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3815 Mtr-Chr7 54996041 54999763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3815 28 763 Miscellaneous Gene Families AT3G04580 61.835 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr7g3815 GAF 1.4e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3815 K14509 - gmx:100805023 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2818 1 39336946 39341292 Mtr7g3815 7 54996041 54999763 ECH
Mtr7g3815 7 54996041 54999763 Mtr7g3815 7 54996041 54999763 ECH