Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3814 ATGGACTCCAATGACAACCAATTAAGCTCTTTCTTCCACCACCACAACCAACAACAACAACAACAACAACAACAACAGCACCACCAACAAAACTCCACCACCGTAACCACCGCCACCGCATCTCCGACGAACGGTCTTTTACCAAACACAGATGGGTCCCACATACTTTACCCTCATTCAGTTGCTTCTTCTGCTGTTTCTTCTCAGCTCGAACCAGCTAAGAGGAAGAGAGGTAGACCTAGAAAATATGGTACTCCTGAACAAGCCCTAGCTGCTAAAAAAGCTTCTACGTCGTCGTTTTCTCCTACTCCACCCACTCTTGACACCACCACCAACAACAAGAATACCCACTCTTTCTCTCCTTCTTCTTCTTCTTTCACCACTAAGAAATCTCATTCTCTCTCTCTAGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGGCAGAAAATTATGCAATTTATGCAACAACATAGGGGTGAGATATGCATTATGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTCCGTCAACCAGCATCTTCAGGAGGCAACATTATGTATGAGGGTCGGTTTGATATTATTTCGCTTACTGGTTCCTATGTCCGTAATGAAACCGGAGGGCGAAGTGGTGGTCTTAGTGTGTGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTATCGACAACAAGAAGGATACTAGTGCTGGTGGAAAAGGTGATCCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAGCCAGCATCAAGTTTAGGTTTCCGCCAAACAGTCGACTCTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCAAGCTATGGGTGGAAGCCATTACATGATTCAACAGCTTGGTTTGCATGTGACACCTCCCAGGACTACAGAATGGGGGACTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGTTCTCAATATTGCAGGAAGAACAGGTCATGGGTCTCACCAGTCTCCTGAGAATGGAGGCTATGACCAAATTCCTGATTGA 1119 0.4629 MDSNDNQLSSFFHHHNQQQQQQQQQQHHQQNSTTVTTATASPTNGLLPNTDGSHILYPHSVASSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPTPPTLDTTTNNKNTHSFSPSSSSFTTKKSHSLSLGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQHRGEICIMSASGSISNASLRQPASSGGNIMYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDTSAGGKGDPSAGKLPSPVGEPASSLGFRQTVDSSSGNPIRGNDEHQAMGGSHYMIQQLGLHVTPPRTTEWGTHPDSRHAGYDLSVLNIAGRTGHGSHQSPENGGYDQIPD* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3814 372 MobiDBLite consensus disorder prediction 352 372 - -
Mtr7g3814 372 ProSiteProfiles PPC domain profile profile. 139 280 IPR005175 -
Mtr7g3814 372 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 364 IPR039605 GO:0003680
Mtr7g3814 372 MobiDBLite consensus disorder prediction 1 70 - -
Mtr7g3814 372 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 255 - -
Mtr7g3814 372 MobiDBLite consensus disorder prediction 288 303 - -
Mtr7g3814 372 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 255 IPR005175 -
Mtr7g3814 372 CDD DUF296 146 255 IPR005175 -
Mtr7g3814 372 MobiDBLite consensus disorder prediction 261 308 - -
Mtr7g3814 372 MobiDBLite consensus disorder prediction 91 130 - -
Mtr7g3814 372 Gene3D - 144 268 - -
Mtr7g3814 372 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 364 - -
Mtr7g3814 372 MobiDBLite consensus disorder prediction 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3814 Mtr-Chr7 54988678 54993450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3814 32 372 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 49.189 1.37e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3814 - - gmx:100809675 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3814 7 54988678 54993450 Mtr7g3814 7 54988678 54993450 ECH