LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g3806	ATGGCTATTCGCCATGTCTGTCTCCATGAAATTGGAATAATTTTCTTGTTCCAGATGATGATTACTTCTGTAAAACCACTCTCATTTAATTACCAACAGGGCTTTAAATATGATAATGTGAAACTAGAAGGAGATGCTTCTTTGCTTTATTCATCCATCCAACTGACTTCAACCTCAAGTTACGAAGACGAAACTTACAGTGTTGGGAGAGTGACATGTTTTGAGCCATTGCAACTATGGGAAAAGACCTCAAGAAAACTCACTGATTTCACTACCCAATTTTCCTTTGTAATTTTCTCTAATAAGACTTATTTTGGAGATGGATTGGCATTTTTCTTTGCAGATCCAAGACTTCCACTTTATTACCATATAAGACAAGGAGGTGGTCTTGGTCTTGTGAATGATTACCAAATATTGAATTCTAATGGATATTCATTTGTAGCAGTGGAGTTTGACACTCACCAAAATGATTGGGATCCACCAGGCACTCATGTAGGTATAAATTTCAATTCTCTGAGGTCTAATATAACTAAACCATGGTTTATGGATATTAGAAATAAGAAGGCTTATCATTGCAAAATTGAGTATAATTCCAGTGCTCATGATTTGAAAGTTTCTTTCACTGAAAACATAACCAATGGTGAGCCTTCATATAGTCACCTCTCATACAATGTTGATTTGAGAGATTACCTACCTGAGAGGGTTATTTTTGGTTTCTCAGCTGCTACAGGATATATGTTTGAGATGAATAAATTGCTGTCATGGTCATTCAATTCAAGTTTAAATCAAACATCTCCAGTTGAAAGTCCTTCACCAGTTCCCAATATTAAAATTAGCATTAAAACTGATAGCAAAGCAGGTAGTATATGGGTTGGGGTAGGAGTTGGTGTAGGCATTGCATCAAGTTTCCTTATTTTAGGATGGTTTTGTATTTCAATGTGGAAGAGATCTAAAGGGAACAAAGAAGATTCAATTTTTGACCTGAAAATGGATGATGAATTCCAAAAGGGCACTGGACCTAAAAAGTTTTGCTATAACAAATTGGTGAGTGCAACAAATAACTTTGCAGAAGCAGAAAAGATAGGGCAAGGTGGTTTTGGTGGTGTTTATAAAGGCTATTTGAAAGATATAGATACCAATGTTGCTATAAAGAGAATATCAAGAGAGTCTAAACAAGGGATAAAGGAATATGCAACTGAAGTGAAGATCATTGGCCAGCTTAGACATAGGAATTTAGTACAACTAATTGGTTGGTGTCACAAGAAAAGGGACTTCCTCCTTATATATGAGTTCATGCAAAATGGTAGCTTAGATTCTCATCTATACCGCGGAAAAAGCGTATTGACATGGCAAATGAGGTACAACATTGCTATGGACTTGGCTTCAGCACTTTTGTACCTTCATGAAGAATGGGAACAATGTGTGCTTCATAGGGATGTCAAATCCAGCAACATCATGTTAGACAACAATTTCAATGCTAAGCTTGGGGATTTCGGATTGGCAAGGCTTGTGGATCATGAGAAAGGATCACAATCAGACACCACAATCATAGCTGGGACCATGGGGTACATAGCTCCTGAATATATCACAACAGGGAAGGCTACAAAGGAATCAGATATATACAGCTTTGGCATTGTTTCATTGGAATTAGCAAGTGGAAGAAAACCAGTTGATCTTAATGCCAAGGAGGATCAAATGGCTATATTTGATTGGGTTTGGGAGCTTTATAGATTAGGAAGGTTGCTTGAAGTAGTAGACACAAAACTCGGGGGTGCATTTGATGAGGAACAAATGGAACGTTTAGTGGTTATTGGTCTTTGGTGTGCCAATCCAAATTATTCATTTAGGCCATCTGTAAGACAAGTGATTCAGGTGCTTAAACTTGAAGCTCCTTTACCAATTCTCCCGCCTCCCATTAAGAGCCCAAATCCTGATCCAGATTCTTCTGCCTCGGTGGCTTACACTTCGTAA	1971	0.3775	MAIRHVCLHEIGIIFLFQMMITSVKPLSFNYQQGFKYDNVKLEGDASLLYSSIQLTSTSSYEDETYSVGRVTCFEPLQLWEKTSRKLTDFTTQFSFVIFSNKTYFGDGLAFFFADPRLPLYYHIRQGGGLGLVNDYQILNSNGYSFVAVEFDTHQNDWDPPGTHVGINFNSLRSNITKPWFMDIRNKKAYHCKIEYNSSAHDLKVSFTENITNGEPSYSHLSYNVDLRDYLPERVIFGFSAATGYMFEMNKLLSWSFNSSLNQTSPVESPSPVPNIKISIKTDSKAGSIWVGVGVGVGIASSFLILGWFCISMWKRSKGNKEDSIFDLKMDDEFQKGTGPKKFCYNKLVSATNNFAEAEKIGQGGFGGVYKGYLKDIDTNVAIKRISRESKQGIKEYATEVKIIGQLRHRNLVQLIGWCHKKRDFLLIYEFMQNGSLDSHLYRGKSVLTWQMRYNIAMDLASALLYLHEEWEQCVLHRDVKSSNIMLDNNFNAKLGDFGLARLVDHEKGSQSDTTIIAGTMGYIAPEYITTGKATKESDIYSFGIVSLELASGRKPVDLNAKEDQMAIFDWVWELYRLGRLLEVVDTKLGGAFDEEQMERLVVIGLWCANPNYSFRPSVRQVIQVLKLEAPLPILPPPIKSPNPDPDSSASVAYTS*	657

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g3806	656	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	475	487	IPR008271	GO:0004672\|GO:0006468
	Mtr7g3806	656	ProSitePatterns	Protein kinases ATP-binding region signature.	361	384	IPR017441	GO:0005524
	Mtr7g3806	656	Pfam	Legume lectin domain	27	266	IPR001220	GO:0030246
	Mtr7g3806	656	MobiDBLite	consensus disorder prediction	637	656	-	-
	Mtr7g3806	656	ProSitePatterns	Legume lectins alpha-chain signature.	231	240	IPR000985	-
	Mtr7g3806	656	PANTHER	LECTIN RECEPTOR KINASE	14	655	-	-
	Mtr7g3806	656	SMART	serkin_6	355	632	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g3806	656	Gene3D	-	25	272	-	-
	Mtr7g3806	656	ProSiteProfiles	Protein kinase domain profile.	355	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g3806	656	PANTHER	-	14	655	-	-
	Mtr7g3806	656	Pfam	Protein kinase domain	356	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g3806	656	SUPERFAMILY	Protein kinase-like (PK-like)	340	641	IPR011009	-
	Mtr7g3806	656	CDD	STKc_IRAK	361	627	-	-
	Mtr7g3806	656	ProSitePatterns	Legume lectins beta-chain signature.	147	153	IPR019825	-
	Mtr7g3806	656	Gene3D	Transferase(Phosphotransferase) domain 1	432	634	-	-
	Mtr7g3806	656	SUPERFAMILY	Concanavalin A-like lectins/glucanases	27	262	IPR013320	-
	Mtr7g3806	656	Gene3D	Phosphorylase Kinase; domain 1	340	431	-	-
	Mtr7g3806	656	CDD	lectin_legume_LecRK_Arcelin_ConA	27	261	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g3806	Mtr-Chr7	54906494	54908464	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g3806	13	636	Receptor kinase-like Gene Family	AT5G10530	45.741	8.72e-176	513

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mtr7g3806		Pkinase	2.5e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g3806	-		-	gmx:100814713	911.753