Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3800 ATGGCAAAAAACCCTTGTTGTGAAAGGATGGGAATGAGGAAAGGACCATGGAGTGCTGAAGAAGATCAAATATTGATTTCTCATATTCAAACATATGGTCATGGAAATTGGCGTGCTCTTCCTAAACAAGCCGGTTTGTTAAGGTGTGGTAAGAGTTGTAGACTTCGTTGGATAAACTACTTGAGACCAGATATCAAACGAGGTAAATTTAGCAAAGAAGAAGAAGATTCAATCCTAAAGCTACATGAAGTTCTTGGTAATAAATGGTCTGCAATTGCAGCAAGATTACCAGGACGAACAGATAATGAAGTGAAGAACTTTTGGCATACACATTTGAAGAAAAAGGTGCAAAAAAGTGAAGTGTACAATGTCAATACCTCTTATTCATATACTTTGGATGAGGCACAAGCAAGTGATGGTTATAGTAGTGTCGGTGAAAAAAGAGTTATTTCCAATTATGGTTTAGTCTCAAGCAAGGATCCAAACACTGTAGGGTCAGGATTTTACAATGCAACCTCTTGTGATACTTTAGGAGAAAATATGGACCATCATGGTTCAAGTCAGATTAGTGAAGAAATTGAATTTTGGTACGATGTATTCATTAAATCAGGTCAACCATCATGA 624 0.3686 MAKNPCCERMGMRKGPWSAEEDQILISHIQTYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDSILKLHEVLGNKWSAIAARLPGRTDNEVKNFWHTHLKKKVQKSEVYNVNTSYSYTLDEAQASDGYSSVGEKRVISNYGLVSSKDPNTVGSGFYNATSCDTLGENMDHHGSSQISEEIEFWYDVFIKSGQPS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3800 207 Gene3D - 68 131 - -
Mtr7g3800 207 CDD SANT 69 112 IPR001005 -
Mtr7g3800 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr7g3800 207 CDD SANT 16 61 IPR001005 -
Mtr7g3800 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr7g3800 207 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr7g3800 207 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mtr7g3800 207 PANTHER MYB TRANSCRIPTION FACTOR 1 204 - -
Mtr7g3800 207 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr7g3800 207 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr7g3800 207 Gene3D - 14 66 - -
Mtr7g3800 207 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr7g3800 207 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 204 - -
Mtr7g3800 207 SMART sant 66 114 IPR001005 -
Mtr7g3800 207 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3800 Mtr-Chr7 54845735 54847055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3800 1 119 MYB Transcription Factor Family AT2G31180 73.109 3.18e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g3800 Myb_DNA-binding 7.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3800 K09422 - gmx:102663040 303.908