Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3797 ATGGGAGCACCGAAGAAAAGCGCTGCTAGGGTTTCAGAGGATCACGACGAGCTTGTTCGTGTTCCGTTACAAGCGATTCTGTTAGCTGATAGTTTTACTACCAAGTTTAGACCTATCACTCTTGAACGCCCCAAAGTGCTTTTGCCATTGGCGAATGTTCCAATGATAAATTACACATTGACATGGCTTGAATCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCGAAGCAGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACTGTAAGCAACATGTCGCTTACTCAGGCACTTTTAGAACATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACCATGGTTATTAAACGGTCCAAAACTCATCCAGCTATCCATCAGTCTCGACTTGGTACCGATGAAATTTTCATGGCTATTGATCCTAATTCCAAGCAACTTTTGTATTACGAGGATAAAGCAGACTTCTCAAAAGGCACTCTACATCTTGAAAATTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCGCCGGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTTCGGCGTCATTTTGTCAAGGGACTGCTTCTTGATGATATAATGGGATACAAAATTTTTGTTCATGAAATCCGCGCAGATTATGCTGCAAGGATTGATAATTTCCGAAGCTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCACTGGTACCAGATGTTATGAATTTTGGCAACACAGCTACTAAGCTTGAAAGACAGGGAATATACCGTGGCTCAGATATTTCGCAAGCACAATCAGCTGTTGTTGGCCCATTCTCTGTTATAGGATCTGGCACCAAAATTGGCAAGAACACGAAGATTTTAAATTCCGTCGTCGGAATAGGATGCAAAATCGGGTCAAATGTACACATAGAGGGATGCTATATATGGGACAATGTCACCATAGAAGATGGCTGTGAACTTAGGCATGCCATTGTATGTGAGGGGGTGATTATGAAATCAGGATCTGCTCTGGAACCTGGTGTTGTGCTGTCTTTTAAGGTTGTAGTTGGGCAGGAGTTTGTTGTTCCTCCTTATTCACAAGTATCTCTACTACAGCAGCCGGTTGAGGAAGATAGCGACGAAGAGCTTGAATATGCTGATAGTACTAGTGCCATCACCAGCACAGTGGATAAGTCAGATGGAGAAACTGCTTCTGAATTATTGGATGGACATTTTACCCCTGCTTCAGAGCTAGGTTTTGGTGGGGCTGGTTATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGAAGAGTGGAGGCATTCAGTGGCGCCTATTACTGAAGATAAAATTTTGGAGGCAGTGAAAGCTATGGAAGATGAACTGGAGTTAATTCATGATGGCAGTATTCTTCCACCTTCTGGGGAGCTGATACCTAATCCTAATGATTCAGATGACGATGACAATGATGATTTAAGAGATGACTTTGACAAAGAGGTTGAAGCAACTTTTCTGAGGGCTGTGCTTGAAAACATACAAGAAAACCATTTGACTTTAGAAGTCAATTCTTTGAAGTTGTCATACAACAAGGTAGCTGCTGATTGTGCTGGAGCTTTATTTTATGCAATGATGAAGTATGCTGTAGACTTGCCCCATAGTTCAGCTGATGGCTTGGTTCAGAATGTTCATGTTGTACTTACTAAGTGGAAAAAGGTTCTTGCATCCTATCTGAATGATACGGACGAGCAGATCGAAGTGATTCTAAAATTTGAAGAAATATGTTTGGAATCTGCGAAGGAGTTTGCTCCATTGTTCACAAAGATTTTGCACTACATGTATAACGAGGATATTATTGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGACGCGGATGAGGCGGATAAAGTATTTGTTAACCAAGCTCAACCATTAATTCAATGGCTAAAAGAGGCTCCCGAAGAAGACGATGAAGACGAAGAGTAG 2049 0.4139 MGAPKKSAARVSEDHDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLANVPMINYTLTWLESAGVEEVFVFCCAHAKQIQGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKTHPAIHQSRLGTDEIFMAIDPNSKQLLYYEDKADFSKGTLHLENSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIRADYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGIYRGSDISQAQSAVVGPFSVIGSGTKIGKNTKILNSVVGIGCKIGSNVHIEGCYIWDNVTIEDGCELRHAIVCEGVIMKSGSALEPGVVLSFKVVVGQEFVVPPYSQVSLLQQPVEEDSDEELEYADSTSAITSTVDKSDGETASELLDGHFTPASELGFGGAGYVWPKCEGGHEEEWRHSVAPITEDKILEAVKAMEDELELIHDGSILPPSGELIPNPNDSDDDDNDDLRDDFDKEVEATFLRAVLENIQENHLTLEVNSLKLSYNKVAADCAGALFYAMMKYAVDLPHSSADGLVQNVHVVLTKWKKVLASYLNDTDEQIEVILKFEEICLESAKEFAPLFTKILHYMYNEDIIEEDAILSWEDEKKDADEADKVFVNQAQPLIQWLKEAPEEDDEDEE* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3797 682 CDD LbH_eIF2B_epsilon 300 378 - -
Mtr7g3797 682 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 83 - -
Mtr7g3797 682 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 81 681 - -
Mtr7g3797 682 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 82 262 IPR029044 -
Mtr7g3797 682 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 10 81 IPR029044 -
Mtr7g3797 682 SUPERFAMILY ARM repeat 514 673 IPR016024 -
Mtr7g3797 682 Gene3D Hexapeptide repeat proteins 278 385 - -
Mtr7g3797 682 MobiDBLite consensus disorder prediction 487 512 - -
Mtr7g3797 682 Pfam eIF4-gamma/eIF5/eIF2-epsilon 601 680 IPR003307 GO:0005515
Mtr7g3797 682 CDD W2_eIF2B_epsilon 517 673 IPR044123 GO:0005085|GO:0031369
Mtr7g3797 682 ProSiteProfiles W2 domain profile. 509 680 IPR003307 GO:0005515
Mtr7g3797 682 SMART 542_3 589 676 IPR003307 GO:0005515
Mtr7g3797 682 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 355 IPR029044 -
Mtr7g3797 682 CDD eIF-2B_epsilon_N 23 198 IPR035543 -
Mtr7g3797 682 Gene3D - 503 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3797 Mtr-Chr7 54818233 54830542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3797 1 673 Eukaryotic Initiation Factors Gene Family AT2G34970 59.116 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3797 K03240 - gmx:100784894 1122.46