Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3793 ATGAGGATTATGATTAAGGGAGGTGTTTGGAAAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCGTATCTCGTCCCTACTTGTTCGCAAATCTGCAAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGACTGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCTACTCAGTGGAGAACCATTGCTCCCATTGTTGGTCGTACTCCTTCGCAGTGTCTTGAACGGTATGAGAAACTCCTTGACACCGCTTGTGTTAAGGATGATAACTATGAACCTGGTGATGACCCTAGGAAATTGCGTCCGGGGGAGATTGATCCGAATCCTGAATCGAAGCCTGCACGACCTGATCCTGTTGATATGGATGAGGACGAGAAGGAGATGCTTTCCGAAGCACGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCAAGGAGGCTCGCTTCTTTACAGAAAAAGAGAGAACTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCCGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCCTGCATTCCCTACTACTATTGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAGGCACAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCAGCTGCTATTCTGCATGCCAACAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCGCCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCGAGGAACTCACCGAAGGTAGCAGTGCTACCCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCAAGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTTTTAGGAGGAGAAAACCCGGAGTTGCATCCTTCAGATTTCTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACACTCCAAACCCGCTGCTGACTCCCTCTGCAACCCCGGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACACCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATAGTGCTAAGCTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGTTGAAGAGCCCGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCGCGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCCAGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTTGAGCATGACAATGCTAAGTATCCGCTTGAAGAGATAGCAAATAAGGAGAGAAAGAAAGGATCCAAACGAGCAGCAAATGGGCCTGCTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGCTGATCAATTGATAAAAGATGAAGCCCAGTATCTTCGTGAGGCAATGGGGCATGAAAATGATTCCCTCGAGGAATTTGTTGAAGCACATACAACTTGCATTAATGATTTAATGTACTTTGATACCCGTAACGCTTATGGTCTATCAAGTGTTGCTGGAAATGCAGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGACGGGAAGGAGAAGTTGATTCGACTTGAGAAGAAGGTTACAACATTCACGCAAGGGTATGAGATGAGATCAAAAAAAGGTCTTTGGCCACAAATCGAGGCCACTTTCAAGCAGATGGACGTGGCTGCAACAGAATTTGAGTGTTTTCAAGCTTTAAAAAAGCAGGAGCAGTCAGCAGCATCACATAGGATAAACAATCTTTGGTCTGAAGTTCAGAAGCAAAAGGAACTTGAGAAAATTTTACAGAAGAGGTATGGGGATCTTACGACAGAGCTGGAAAGGACCCAAAATGTAATGGAGCACTTCAGGGTACAAGCACAACAGAAGGAAGAAATTGAAGCCAAGAATCATGCACAAGAAGAGGTACAAGCACAGCAAAAGGAAGAAATCGAAGCCAAGAATCATGCAATAGAAGAGGTACAAGCACAACAGCAAGAAGAAACTGAAGCTAAGAATCATGTACTTGAGAGTACTGAAGCCACAGCTGATGAAATTAATGTGCAGGGTACAGAAAATAGTGAAGCGGTGCCCCTCTCAGCGGACCAGCAAATAGCTACCATGCAAGATCAGGCTACTTCTAGCTCCAAAATCGACATGGATGTGGATTCTAGTGAAGCACAAATGACAGACAGTACTGGTGTTACATTGCCAGATGCACCTGTTGCAGAGGATGGGCATTCAAATGTTCTAGAAGACAAAAACGTTGAAAGTTATATTGAAAATAGTGAGACTACAGTAGATATGAGTGCTGCGGTGGAAATAAAAAGTAATGAGGGAAATGAGGAGGGTCAAGATGTTGGGAATCCAGATGAGATTATGGAAGCTTCAAACCAACCTGATAATAGCATAACTCCGCTTGATGACATGCAAGTTGCTGATGGTAAAGGAGATGAGGCAAATTAG 3015 0.4464 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPPGYFDVADEDREVEQPAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEELTEGSSATRALLPNYPQTPNQAKTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMEMRDSAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDVEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPPASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKERKKGSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCINDLMYFDTRNAYGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKLIRLEKKVTTFTQGYEMRSKKGLWPQIEATFKQMDVAATEFECFQALKKQEQSAASHRINNLWSEVQKQKELEKILQKRYGDLTTELERTQNVMEHFRVQAQQKEEIEAKNHAQEEVQAQQKEEIEAKNHAIEEVQAQQQEETEAKNHVLESTEATADEINVQGTENSEAVPLSADQQIATMQDQATSSSKIDMDVDSSEAQMTDSTGVTLPDAPVAEDGHSNVLEDKNVESYIENSETTVDMSAAVEIKSNEGNEEGQDVGNPDEIMEASNQPDNSITPLDDMQVADGKGDEAN* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3793 1004 CDD SANT_CDC5_II 55 106 - -
Mtr7g3793 1004 MobiDBLite consensus disorder prediction 324 359 - -
Mtr7g3793 1004 SMART sant 58 105 IPR001005 -
Mtr7g3793 1004 SMART sant 6 55 IPR001005 -
Mtr7g3793 1004 Coils Coil 812 854 - -
Mtr7g3793 1004 MobiDBLite consensus disorder prediction 380 424 - -
Mtr7g3793 1004 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Mtr7g3793 1004 SUPERFAMILY Homeodomain-like 33 107 IPR009057 -
Mtr7g3793 1004 Pfam Myb-like DNA-binding domain 10 70 - -
Mtr7g3793 1004 Coils Coil 167 187 - -
Mtr7g3793 1004 MobiDBLite consensus disorder prediction 957 1004 - -
Mtr7g3793 1004 MobiDBLite consensus disorder prediction 409 423 - -
Mtr7g3793 1004 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Mtr7g3793 1004 Gene3D - 59 114 - -
Mtr7g3793 1004 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Mtr7g3793 1004 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 798 - -
Mtr7g3793 1004 Gene3D - 5 58 - -
Mtr7g3793 1004 Coils Coil 689 716 - -
Mtr7g3793 1004 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Mtr7g3793 1004 MobiDBLite consensus disorder prediction 110 149 - -
Mtr7g3793 1004 CDD SANT 10 53 IPR001005 -
Mtr7g3793 1004 MobiDBLite consensus disorder prediction 324 355 - -
Mtr7g3793 1004 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3793 Mtr-Chr7 54784424 54791278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3793 1 833 MYB-Related Transcription Factor Family AT1G09770 74.522 0.0 1222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g3793 Myb_Cef 5.7e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3793 K12860 - gmx:100790369 1436.78