Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3792 ATGCCTTCTTCATCTTCACCTGTTCTTCCCAGTCTTATGGAAAGCAATTATATGAAACCCCCAGATTCTTTCAATTGTTCACCTGTCAGGAGTCTGACAGCAAATCCTGCCTCATTGCAAGCTACATCGTCGTATCCGATCAGAAGTGTTCGACCGGTGTTTTCAACCAATGCTGAATGTCCTGGTGGTGTCCCTTTCCCCCCCGTTTCACAACATGATAGGCAATATCAAGATTCTCCCTTCACTTCTCAGGCATTAGGTGACAATGTGTCTTCGGAAATCCACTCAGCAACATTCACTTCTCACCTTCAAGAAAATGATGATATATCGTGGGGCCCAGATCCATTGCCGGATATTCTTGGTTTTCCTGATATTTTTTCTGTCCAGCATGATCAGGTGGAAAACAGTGCTTGTTACATGAATGAAGACAATGTCAAAAAAACTGATTTTGGGGAGTGGGTTGAACAGCTAATGACAAGTGATGATTCTGTTAATCCAAATTGGAGTCAGCTTCTTGGTGATGACAATGTTGTTGAACCAACACAAAAGGCGATGCATGTTTCTCAGAAGCAGCATACATCATCTGGAGAAGTCAACAATCTTTGTAATCCTGCTTCAGCTTCAGCATCAGCATCAACTGCATCTCAAACTAAGCCTAGAATGCGTTGGAGTCCAGAACTTCACGAAGCTTTTGTGGAAGCAGTCAACCAGCTTGGTGGTAGCGAGAAGGCTACTCCAAAAGGTGTCTTGAATCTAATGAATGTTGAGGGCCTTACTATCTACCATGTAAAAAGCCACCTCCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCACCAGAAGAAACTTCTGAGAAAAAGATGAGTTCAATTGAGGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGAATCACTGAAGCATTACGGTTGCAGATGGAACTCCAGAAGCGGCTTCACGAACAACTTGAGATTCAAAGGAAGTTGCAGATTCAAATTGAAAACCAAGGGAAACATCTTGAGATGATGTTTGAGAAACAGAAACAGATTGGTGACAACAAGGGCCCTTCCCCTTCAAATGCACCTTCTGCTGCAGTGTTGGACACGACGCTGCCTTCTTCTCCGGTGGACAATTTAAAAACTTCAAAAGATGAATGCGATAAATCAGGATGTAACGCTGATATTCCTAAAGACATACCCGGAGAAAGTTCCCATGATGTAAGCAGAAAGCAAATGGCAGATGAAGCTGAAGTTACCAATGAACATGAGAGGGTAGATGATCAGTTTTCTGACGTACCTCCAACAAAACGAGCGAAGATTCAATGA 1326 0.4268 MPSSSSPVLPSLMESNYMKPPDSFNCSPVRSLTANPASLQATSSYPIRSVRPVFSTNAECPGGVPFPPVSQHDRQYQDSPFTSQALGDNVSSEIHSATFTSHLQENDDISWGPDPLPDILGFPDIFSVQHDQVENSACYMNEDNVKKTDFGEWVEQLMTSDDSVNPNWSQLLGDDNVVEPTQKAMHVSQKQHTSSGEVNNLCNPASASASASTASQTKPRMRWSPELHEAFVEAVNQLGGSEKATPKGVLNLMNVEGLTIYHVKSHLQKYRTARYKPESPEETSEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKHLEMMFEKQKQIGDNKGPSPSNAPSAAVLDTTLPSSPVDNLKTSKDECDKSGCNADIPKDIPGESSHDVSRKQMADEAEVTNEHERVDDQFSDVPPTKRAKIQ* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3792 441 MobiDBLite consensus disorder prediction 349 441 - -
Mtr7g3792 441 MobiDBLite consensus disorder prediction 399 433 - -
Mtr7g3792 441 SUPERFAMILY Homeodomain-like 216 272 IPR009057 -
Mtr7g3792 441 MobiDBLite consensus disorder prediction 352 379 - -
Mtr7g3792 441 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 441 IPR044848 GO:0003700
Mtr7g3792 441 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 441 - -
Mtr7g3792 441 MobiDBLite consensus disorder prediction 72 86 - -
Mtr7g3792 441 MobiDBLite consensus disorder prediction 272 294 - -
Mtr7g3792 441 Coils Coil 306 326 - -
Mtr7g3792 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 215 275 IPR017930 -
Mtr7g3792 441 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 272 IPR006447 GO:0003677
Mtr7g3792 441 MobiDBLite consensus disorder prediction 187 220 - -
Mtr7g3792 441 MobiDBLite consensus disorder prediction 64 86 - -
Mtr7g3792 441 Pfam Myb-like DNA-binding domain 220 271 IPR001005 -
Mtr7g3792 441 Pfam MYB-CC type transfactor, LHEQLE motif 305 349 IPR025756 -
Mtr7g3792 441 Gene3D - 217 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3792 Mtr-Chr7 54776214 54780485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3792 93 379 G2-like Transcription Factor Family AT3G04450 48.505 1.64e-79 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr7g3792 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3792 - - mtr:MTR_7g115530 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3792 7 54776214 54780485 Mtr1g2841 1 39561843 39566158 PCT