Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3775 ATGGCTCCCGATGCTTCCGACGCACTTGCAGTTAGGCAGAAAGTTCAACACTTTCTCAACGCTGCTCGTACCGGCAATCTCGATCTCTTAAAGAAATTTGCGGAACAGTTAGATGAGGGCAAAGATTTATCCAAAACAGTTGAAGCAATTAAAGATGCAAACAAGCGTGGAGCACTTCATTTTGCTTCTCTTGAAGGACAAACTCAGATTTGCAGTTATCTTATAGAGGATTTGAAACTTCGTATCAATGATAAAGACGATGACGGTGAAACTGCCCTCATTCATGCTGCACGTCAGGGACACACTGCCACTGCTAAGTATCTGATTGATCATGGCGCTGATCCTACTATTGCTAGCAATTTAGGAACTACGGCTTTGCATCATTCTGCTGGAATAGGAGATACGGATTTACTTGAGCATTTGCTGTCCAGAGGAGTTAATCCTGATTTAGAAAGTGATTCGGGAACACCTTTGGTTTGGGCGGCTGGTCATGCTCAAGAAGCTGCTGTTACTGTTCTATTAAAACATGGTGCAAATCCCAATGCTGAAACTGATGATGGCATTACCCCACTCATTTCATCTGTTGCAGCTGATTCTTTGGCATGCTTAGAGCTGTTAATACAGGCAGGTGCTAAAGTAAATGTTAGTGCTGGTGGAGCAACTCCTTTGCACATTGCAGCTGATAATGGAAGTCTAGAACTTATAAATTCCCTGTTGAAAGCAGGAACTGATCCTAATGTCTCTGACGAGGATGGTGTTAAGCCAATACAGGTTGCAGCTGGAAGGGGAAATCGTGGAGCTGTTGAGATATTGTTCCCCATGACATCCAAAATTGATGCTATTCCTTCTTGGACTATTGATGGGATACTTGAGCATGTGCAATCCGAAAGTAAAAAGCAGCAGGATGAATCGCTAAATGCTAAAGAAAATAACTGGTCTGTGGATGCTACTGTTTCTCAAGAGCAAAATATCCCTGAGGTGTCACCTGAAGCCAAAAAGAGAGCAGCAGAATCAAAATCAAGAGGGGATGAGGCTTTTAAAAGGAATGACTATCATACGGCTATAGATTCCTATACACAAGCAATTGATTTGAATCCCAGTGATGGTACATTGTTTTCAAATAGAAGTCTATGTTGGATGAAGCTAGGTCAAGCTGAGCAGGCTTTAGCTGATGCAAAGGCATGTAGAGCATTAAGACCAGATTGGTCCAAAGCTTGTTATAGGGAAGGCGCAGCCTTGCGTTTGTTGCTGAGGTTTGATGAAGCTGCAAATGCTTTTTACGAGGGAGTAACACTTGACCCTGAGAGCAAGGAGCTTGTAAATGCGTTCAGGGAAGCTGTTGAAGCTGGAAGGAAATTTCATGGCACAACTAAAGATAAATCGTAG 1386 0.4286 MAPDASDALAVRQKVQHFLNAARTGNLDLLKKFAEQLDEGKDLSKTVEAIKDANKRGALHFASLEGQTQICSYLIEDLKLRINDKDDDGETALIHAARQGHTATAKYLIDHGADPTIASNLGTTALHHSAGIGDTDLLEHLLSRGVNPDLESDSGTPLVWAAGHAQEAAVTVLLKHGANPNAETDDGITPLISSVAADSLACLELLIQAGAKVNVSAGGATPLHIAADNGSLELINSLLKAGTDPNVSDEDGVKPIQVAAGRGNRGAVEILFPMTSKIDAIPSWTIDGILEHVQSESKKQQDESLNAKENNWSVDATVSQEQNIPEVSPEAKKRAAESKSRGDEAFKRNDYHTAIDSYTQAIDLNPSDGTLFSNRSLCWMKLGQAEQALADAKACRALRPDWSKACYREGAALRLLLRFDEAANAFYEGVTLDPESKELVNAFREAVEAGRKFHGTTKDKS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3775 461 PANTHER BNAC03G33870D PROTEIN 1 460 - -
Mtr7g3775 461 MobiDBLite consensus disorder prediction 319 346 - -
Mtr7g3775 461 SMART tpr_5 369 402 IPR019734 GO:0005515
Mtr7g3775 461 SMART tpr_5 335 368 IPR019734 GO:0005515
Mtr7g3775 461 SMART tpr_5 403 436 IPR019734 GO:0005515
Mtr7g3775 461 ProSiteProfiles TPR repeat profile. 335 368 IPR019734 GO:0005515
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat profile. 153 185 IPR002110 GO:0005515
Mtr7g3775 461 SUPERFAMILY Ankyrin repeat 18 272 IPR036770 -
Mtr7g3775 461 PRINTS Ankyrin repeat signature 122 137 IPR002110 GO:0005515
Mtr7g3775 461 PRINTS Ankyrin repeat signature 169 183 IPR002110 GO:0005515
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat profile. 186 218 IPR002110 GO:0005515
Mtr7g3775 461 MobiDBLite consensus disorder prediction 327 346 - -
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat profile. 88 120 IPR002110 GO:0005515
Mtr7g3775 461 Coils Coil 290 310 - -
Mtr7g3775 461 ProSiteProfiles TPR repeat profile. 403 436 IPR019734 GO:0005515
Mtr7g3775 461 Pfam Ankyrin repeats (3 copies) 20 117 IPR002110 GO:0005515
Mtr7g3775 461 Pfam Ankyrin repeats (3 copies) 122 182 IPR002110 GO:0005515
Mtr7g3775 461 Pfam Ankyrin repeats (3 copies) 186 249 IPR002110 GO:0005515
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat region circular profile. 218 250 - -
Mtr7g3775 461 SMART ANK_2a 251 280 IPR002110 GO:0005515
Mtr7g3775 461 SMART ANK_2a 88 117 IPR002110 GO:0005515
Mtr7g3775 461 SMART ANK_2a 153 182 IPR002110 GO:0005515
Mtr7g3775 461 SMART ANK_2a 121 150 IPR002110 GO:0005515
Mtr7g3775 461 SMART ANK_2a 54 84 IPR002110 GO:0005515
Mtr7g3775 461 SMART ANK_2a 186 215 IPR002110 GO:0005515
Mtr7g3775 461 SMART ANK_2a 218 247 IPR002110 GO:0005515
Mtr7g3775 461 SUPERFAMILY TPR-like 334 446 IPR011990 GO:0005515
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat region circular profile. 121 153 - -
Mtr7g3775 461 Gene3D Tetratricopeptide repeat domain 333 448 IPR011990 GO:0005515
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat region circular profile. 88 114 - -
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat profile. 218 250 IPR002110 GO:0005515
Mtr7g3775 461 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 460 - -
Mtr7g3775 461 Gene3D - 5 154 IPR036770 -
Mtr7g3775 461 Gene3D - 155 330 IPR036770 -
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat profile. 121 153 IPR002110 GO:0005515
Mtr7g3775 461 ProSiteProfiles Ankyrin repeat region circular profile. 186 215 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3775 125 332 Ion Channels AT4G32500 28.302 2.25e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3775 - - gmx:100798118 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3775 7 54645043 54650694 Mtr7g3775 7 54645043 54650694 ECH