Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3772 ATGGTTGTGAAAGTGAAGAGAGAAAATCTTGAAGCATGCATGACATGTCCTCTTTGTCATAAGCTACTCAAAGATGCTACAACCATATCTCTATGCCTTCATACTTTTTGTAGGAAGTGTATACATGAGAAACTTTCAGATGAAGAGGTTGATTCCTGTCCGGTATGCAACATTGATCTGGGTATCCTTCCTGTCGAAAAACTCAGGCCTGATCACAATCTGCAAGATATTAGGACCAAAATATTCCCATGTAAACGACAAAAGGTTAAAGCCGAAGAAGTTGTTCCCTCAACACCCCTGCCACCAAAAAGGAAGGAAAGATCACTTTCATCATTGGTGGTCAGTGCTCCCAAAGTTTCAACACATACCACCTTTACAGGAAAGAGAACAAAAACTGCTACAAGAAAGGCTGCTGCTTTACGTGGATGCAGTTTTATCCCTGAAGAAACCATAAAGAAAGAAGAAACACACAATGAAGATAATCCGGATTCTTCAATAGCTGAGACTTCTAAGAAGAATAGACCCAACGAAGATACAGACAACAATATAGACCTTACAGAAGGGAAGGCTGATCTCTGGACGCCCTTGAACTGTCTTGTCGAAGCAGCCAATAGAACAAAGTCATCCAGATCAAATTTACAAGGGACCCCTCTTACCAAATTAGAGTCTCCAACTACTCCTCATGGTGGACTAGAGATGTCTGAAATTACAACCAAATCGGAGCCACCTACATCTGTTCAGGGTGAATTACACATGCCTAAAACCAAGAACAAAAGTAATGGACATAAAACAAAGTTTGGAGATGACAAGGGGGGAAACACCATGCCTTCAGGACCAGTGAAGCGAAAAAGGATGCGTCCTTCTAAACAGAAGAGAGCAGCAGCATTTGAGATGTCTGCCTCAGCACAACTCATGTTAGATGCAACAGAGAGCAGGTGCAACAGGAAAAACAATCCTATTTGGTTTACATTAGTTGCTTCAGAAGACCAGAATGGAGAAGTTTCCTTGCCACAGATCTCGGCTTGCTACTTAAGAATAAAGGATGGTACTGTGCCTGTCTCGTATATTCAAAAGTACCTCATGAAGAAACTTAATCTTGCTAGTGAAGCTGAGGTTGAAATAATGTGCCGGGGTCAATCTGTGCTCCCAACATTGCAACTGCATAACTTAGTAGATCTGTGGTTCTGCACAGCATCAACATCGAAAAAGTTACCGGCATCTGTGGGCTCTTCGGCTAAGGACTTTGTGATGGCTTTATCGTACTGTCGAAAGACCTTACCTCATTGA 1287 0.4211 MVVKVKRENLEACMTCPLCHKLLKDATTISLCLHTFCRKCIHEKLSDEEVDSCPVCNIDLGILPVEKLRPDHNLQDIRTKIFPCKRQKVKAEEVVPSTPLPPKRKERSLSSLVVSAPKVSTHTTFTGKRTKTATRKAAALRGCSFIPEETIKKEETHNEDNPDSSIAETSKKNRPNEDTDNNIDLTEGKADLWTPLNCLVEAANRTKSSRSNLQGTPLTKLESPTTPHGGLEMSEITTKSEPPTSVQGELHMPKTKNKSNGHKTKFGDDKGGNTMPSGPVKRKRMRPSKQKRAAAFEMSASAQLMLDATESRCNRKNNPIWFTLVASEDQNGEVSLPQISACYLRIKDGTVPVSYIQKYLMKKLNLASEAEVEIMCRGQSVLPTLQLHNLVDLWFCTASTSKKLPASVGSSAKDFVMALSYCRKTLPH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3772 428 MobiDBLite consensus disorder prediction 230 254 - -
Mtr7g3772 428 SMART ring_2 16 56 IPR001841 -
Mtr7g3772 428 SUPERFAMILY RING/U-box 10 80 - -
Mtr7g3772 428 Pfam Zinc finger, C3HC4 type (RING finger) 16 56 - -
Mtr7g3772 428 Gene3D - 287 405 - -
Mtr7g3772 428 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 105 IPR013083 -
Mtr7g3772 428 ProSitePatterns Zinc finger RING-type signature. 32 41 IPR017907 -
Mtr7g3772 428 MobiDBLite consensus disorder prediction 148 187 - -
Mtr7g3772 428 MobiDBLite consensus disorder prediction 148 185 - -
Mtr7g3772 428 MobiDBLite consensus disorder prediction 206 290 - -
Mtr7g3772 428 ProSiteProfiles Zinc finger RING-type profile. 16 57 IPR001841 -
Mtr7g3772 428 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 2 425 IPR044807 GO:0004842
Mtr7g3772 428 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 2 425 - -
Mtr7g3772 428 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3772 Mtr-Chr7 54624164 54629743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3772 1 347 C3H Transcription Factor Family AT2G30580 45.777 4.41e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3772 K16277 - gmx:100783999 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2670 1 37708248 37710618 Mtr7g3772 7 54624164 54629743 ECH
Mtr7g3772 7 54624164 54629743 Mtr7g3772 7 54624164 54629743 ECH