Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr7g3758 | ATGGTTCCATCACTTTGTGCCAATGGTTGTGGTTACTATGGTCTTCCTTCAAACAAGAACCTTTGTTCAAAGTGTTACAATGTTTATCTCAAAGAAAACATTGTTCTTGAGTCATCGTCTTCTTGTCCTTCAAAGAACCCTAGTATCAATGATATTTGTGATGCTGTGGCAGCTATTTCTCTCATTGACAGTGATAACATGAAGGAGAAGAAAACTAGGTGCAAGAGTTGCAACAAAAAAGTGGGACTAACAGGGTTCAAGTGTCGGTGTGGTGATGTATTTTGTGGAATGCATAGATATCCAGAAGAACATACATGCAAAGTGGATTTAAAGAAGATTGGTCGTCAAATATTAGAGAAACAAAATCCTTTGTGTATGGGTGATAAGTTAAAATACCGAATCTAG | 405 | 0.3704 | MVPSLCANGCGYYGLPSNKNLCSKCYNVYLKENIVLESSSSCPSKNPSINDICDAVAAISLIDSDNMKEKKTRCKSCNKKVGLTGFKCRCGDVFCGMHRYPEEHTCKVDLKKIGRQILEKQNPLCMGDKLKYRI* | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr7g3758 | 134 | SUPERFAMILY | AN1-like Zinc finger | 63 | 128 | IPR035896 | - | |
| Mtr7g3758 | 134 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 3 | 134 | - | - | |
| Mtr7g3758 | 134 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 5 | 33 | - | - | |
| Mtr7g3758 | 134 | Gene3D | - | 56 | 128 | IPR035896 | - | |
| Mtr7g3758 | 134 | Pfam | AN1-like Zinc finger | 74 | 108 | IPR000058 | GO:0008270 | |
| Mtr7g3758 | 134 | SMART | A20_3 | 3 | 27 | IPR002653 | GO:0003677|GO:0008270 | |
| Mtr7g3758 | 134 | Gene3D | - | 1 | 51 | - | - | |
| Mtr7g3758 | 134 | ProSiteProfiles | Zinc finger A20-type profile. | 1 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
| Mtr7g3758 | 134 | SMART | AN1_Zf_4 | 74 | 111 | IPR000058 | GO:0008270 | |
| Mtr7g3758 | 134 | ProSiteProfiles | Zinc finger AN1-type profile. | 68 | 114 | IPR000058 | GO:0008270 | |
| Mtr7g3758 | 134 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED | 3 | 134 | - | - | |
| Mtr7g3758 | 134 | Pfam | A20-like zinc finger | 4 | 27 | IPR002653 | GO:0003677|GO:0008270 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr7g3758 | Mtr-Chr7 | 54473713 | 54474326 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr7g3758 | 5 | 131 | C2H2 Transcription Factor Family | AT3G52800 | 38.961 | 5.42e-27 | 97.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr7g3758 | - | - | gmx:102663114 | 171.4 |