Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3754 ATGGGGAAGGCAAGCAAATGGATTAGAAACCTTCTTCTAGGGAAAAAAGAAGAGAACTTCAAGCAGATTGATACATTCTGCCCCGATAATAAGACCGCAAACACGGTTAATAGTAGTAGCAGCAGTAATAGTAATAAGATGGTAGTGAAGCGCAGATGGAGCTTCCGAAAACTAACAAGTGGAAGATCAACGGGCAAGGTAGTAGCTCATAAAATTTCCAAGTCTTTTGATTCAGATGACTCTCCAAAATTACAAATACAAGGCCTGTTCTATACTCAGTCCCCAAGGTTTCGTCCAACAGCTGCTGAATTTGTGAAAAAAGCTGCTACAAAGATTCAAGCTTCCTTTCGCTCCTACTTGGCAAGGAGAGCATTGCATGCTTTAAAGGGATTGGTGAAGTTACAGGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCAACACTACGTGGAATGCATGCATTGATGTCGATACAAGTTAGAGCACGAATTAAAAGGATTAAGATGGCAGAAGAAGTAAATCCCCTCGAAATACAACCTCCAAAACACACAGAAATTCCCTCCTTCAAAGGTCAAATGATACAACAAAATCAATATTCAAAGAATATGAGCATGGAAGAAATGTTGGAGGTTATGAGAAGTAGAAGTGGTCCACTAGATGTTAAAAGCAGAAAGTATGACTCAATGGCATATTATTCAAGAAGTCGATCAATTTCAAAACGAGAAAATCAATTGAAAAAGAAGGAGAATCACATGAATAATAATCCTAGAACAATTCTCACAGCACCAAACAGCCCAGAAAAGTACTACAGTGACATGATTGAATATATGGACCCAACAACCTTATCAACATCTCAGCGTCACATTATTGTGCCTCCTAGAAAATCATGGTCATCACCAAGTTACATGAACAAGACAGAATCTTCTAGGGCAAAAACAAGGTCTATTAGTGAACCAAGACAAAGACCTAAACAAGGAACAGAACAGAGAAACAAGTCTATAGAATTTGCTTCTTTGAAGCAAAATATGTTGTCAAACTCAGCACGCTATGATCATTGGGTTGTTAATTCAATGAAGGAGAGTAAGCATGATTCCTTTGGTAGCTATGCGGTTACTACTAGTGATGATTCCTATTATTACTCGTGA 1152 0.3863 MGKASKWIRNLLLGKKEENFKQIDTFCPDNKTANTVNSSSSSNSNKMVVKRRWSFRKLTSGRSTGKVVAHKISKSFDSDDSPKLQIQGLFYTQSPRFRPTAAEFVKKAATKIQASFRSYLARRALHALKGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEVNPLEIQPPKHTEIPSFKGQMIQQNQYSKNMSMEEMLEVMRSRSGPLDVKSRKYDSMAYYSRSRSISKRENQLKKKENHMNNNPRTILTAPNSPEKYYSDMIEYMDPTTLSTSQRHIIVPPRKSWSSPSYMNKTESSRAKTRSISEPRQRPKQGTEQRNKSIEFASLKQNMLSNSARYDHWVVNSMKESKHDSFGSYAVTTSDDSYYYS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3754 383 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Mtr7g3754 383 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Mtr7g3754 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 366 - -
Mtr7g3754 383 MobiDBLite consensus disorder prediction 287 333 - -
Mtr7g3754 383 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Mtr7g3754 383 MobiDBLite consensus disorder prediction 313 331 - -
Mtr7g3754 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 147 IPR027417 -
Mtr7g3754 383 PANTHER IQ-DOMAIN 5-RELATED 1 366 - -
Mtr7g3754 383 SMART iq_5 127 148 IPR000048 GO:0005515
Mtr7g3754 383 SMART iq_5 104 126 IPR000048 GO:0005515
Mtr7g3754 383 MobiDBLite consensus disorder prediction 287 312 - -
Mtr7g3754 383 MobiDBLite consensus disorder prediction 236 267 - -
Mtr7g3754 383 Gene3D - 102 158 - -
Mtr7g3754 383 Pfam Protein of unknown function (DUF4005) 253 354 IPR025064 -
Mtr7g3754 383 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Mtr7g3754 383 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3754 Mtr-Chr7 54459754 54462460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3754 1 337 IQD Protein Family AT4G14750 35.977 6.64e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3754 - - gmx:100527816 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3754 7 54459754 54462460 Mtr7g3754 7 54459754 54462460 ECH