Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3753 ATGCATGTAGAGTATAGTAGTAGAGCTGCTTTGGTAGCATTAGCAAACATGTTGGATGAAGGAGAACATTTTGAATTTGAGCAATTGAGTAGTACTACTACTACTAGTCTTCTTCCTTCGTCTTCTTCTTCTTCTTCTGTTGCAAACATCAACAACACCTTCCACCACATACCCTTAATTCCTTCTACTTCTACTTCCAATTCTCATGATCAATTTCCACTTCAAACTCAAATAAACCTCTTCCACCCATCAATATTATCATTGCCCCACCACTCCCCTAACACCACTACCTTTAATTCTAATTCTAATTCAATCAACTTCCAGATCCAAATTCCACCACCGTTGATCATCGATTCTAGCTGGACCAACCACGAACTTCTTGTACTCTTCAAGATCACATCTACCATCCACAATTTCTTCCCAGATCAACTCATCACATGGGATCATGTCTCAAGTAAGCTAGCTGAGCTTGGGATCAAGAAGAGTGCTCAAAATTGTAAGGAGAAGTTTGAACATGAGAACGCATCATTTTTCCCCCGGTTCGTTAGCGAGCTTCAAGATCTTTATCAAGGTGGTGGTTTTAGTGTTGACGAAAACACCCAACTCGAAGAAGATGATAGATTAGAGACCAAGCAATGTGATGATGATGACGACAAGGTGAGGATGGAGAAATCAAAGAACAAAAAGAGGAAGAGGCGCCGTGATAGATTTGAAATGTTGAAGAGTTTTTGTGAGACAGTGGTTAATAAAATAATAGCACAACAAGAAGAAATACACAATAAGCTACTTGAAGACATGCTCAAAAGAGATCAAGAAAAGCTTGATAGAGAGGAAACATGGAAAAAACAAGAGATTGAAAGGATGAACATGATGGTACAAGAACAACAAGCTATTGCAAGTGATAGACAAGCCAACATCATTGAATTCTTGAACAAATATCTAGCCACAGGATATTCTTCTTCTTCTTCTACACAATTGCACCCACAAAACCCTAATAATCCTTCTAACAATCTAGAATCAAAAACACCTTTTTCTAATGTGATAGCAGATCAAAACCCTAGCTCAAGTGACACAGAGTACTCAAATTCCACTTCTACCCTTGTTGTGCCTACAATAATGGAGAAATTAGAGGATAGGAGAAGGTGGCCAAGAGATGAAGTGTTGGCACTCATAAACCTCAAGTCTACTACAAGTGTAATAAACAGAAGCAACAATAATGTTGAAGGAAATAGTAATAAGGGACCTTTGTGGGAGAGAATCTCTGAAGGGATGTTTGAGTTGGGATACAAGAGAAGCGCAAAGAGGTGTAAAGAAAAATGGGAAAACATAAATAAGTATTTTAAAAAGACAAAGGATATTGTTGTGAATAAGAAGAAAAGGTCAATGGATTCTAGGACTTGTCCTTATTTTCATCAACTCAGTTCTTTGTATAATCAGCAGCAGGAAAAATAA 1452 0.3774 MHVEYSSRAALVALANMLDEGEHFEFEQLSSTTTTSLLPSSSSSSSVANINNTFHHIPLIPSTSTSNSHDQFPLQTQINLFHPSILSLPHHSPNTTTFNSNSNSINFQIQIPPPLIIDSSWTNHELLVLFKITSTIHNFFPDQLITWDHVSSKLAELGIKKSAQNCKEKFEHENASFFPRFVSELQDLYQGGGFSVDENTQLEEDDRLETKQCDDDDDKVRMEKSKNKKRKRRRDRFEMLKSFCETVVNKIIAQQEEIHNKLLEDMLKRDQEKLDREETWKKQEIERMNMMVQEQQAIASDRQANIIEFLNKYLATGYSSSSSTQLHPQNPNNPSNNLESKTPFSNVIADQNPSSSDTEYSNSTSTLVVPTIMEKLEDRRRWPRDEVLALINLKSTTSVINRSNNNVEGNSNKGPLWERISEGMFELGYKRSAKRCKEKWENINKYFKKTKDIVVNKKKRSMDSRTCPYFHQLSSLYNQQQEK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3753 483 SMART sant 117 176 IPR001005 -
Mtr7g3753 483 SMART sant 378 446 IPR001005 -
Mtr7g3753 483 PANTHER - 36 317 - -
Mtr7g3753 483 PANTHER - 325 481 - -
Mtr7g3753 483 Gene3D - 121 177 - -
Mtr7g3753 483 Gene3D - 382 449 - -
Mtr7g3753 483 MobiDBLite consensus disorder prediction 320 364 - -
Mtr7g3753 483 CDD GT1 380 451 - -
Mtr7g3753 483 ProSiteProfiles Myb-like domain profile. 379 444 IPR001005 -
Mtr7g3753 483 Pfam Myb/SANT-like DNA-binding domain 379 475 IPR044822 -
Mtr7g3753 483 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 325 481 - -
Mtr7g3753 483 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 36 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3753 Mtr-Chr7 54454913 54456958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3753 237 479 Trihelix Transcription Factor Family AT5G28300 46.429 2.65e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr7g3753 Myb_DNA-bind_4 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3753 - - mtr:MTR_7g114860 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3753 7 54454913 54456958 Mtr1g2879 1 39994399 39996909 PCT