Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3742 ATGGCGGACAAAGCCGTTACCATCAGGACCAGGAAGTTCCTCACCAACCGCCTGCTTTCACGAAAGCAATTCGTTGTCGAAGCTAATCATCCTGGGAAACCAAATGTTTCTAAGTCTGAGCTTAAGGAGAAGCTGGCAACAATGTATGGAGCAAAGGACAACACTGTGTTTGTCTTTGGATTACAAACAAATTTTGGAGGTGGCAAATCTACTGGTTTTGGTTTGATTTATGATTCAGTTGACAACGCAAAGAAGTACGAGCCCAAGTACAGACTTATCAGGAATGGCCTTGACACAAAAGTAGAGAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGTGTAAAGAAGACCAAGGCTTCTGATGCTGCTAAGGCTGGAAAAAAGAAATGA 411 0.4258 MADKAVTIRTRKFLTNRLLSRKQFVVEANHPGKPNVSKSELKEKLATMYGAKDNTVFVFGLQTNFGGGKSTGFGLIYDSVDNAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3742 136 MobiDBLite consensus disorder prediction 101 136 - -
Mtr7g3742 136 ProSitePatterns Ribosomal protein S24e signature. 65 87 IPR018098 -
Mtr7g3742 136 Gene3D - 1 131 - -
Mtr7g3742 136 PANTHER 40S RIBOSOMAL PROTEIN S24 1 136 - -
Mtr7g3742 136 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 107 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mtr7g3742 136 PANTHER 40S RIBOSOMAL PROTEIN S24 1 136 IPR001976 GO:0003735|GO:0005840|GO:0006412
Mtr7g3742 136 Hamap 30S ribosomal protein S24e [rps24e]. 4 105 IPR001976 GO:0003735|GO:0005840|GO:0006412
Mtr7g3742 136 Pfam Ribosomal protein S24e 25 102 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3742 Mtr-Chr7 54367980 54373419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3742 1 131 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 75.758 1.39e-70 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3742 K02974 - sind:105163278 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3742 7 54367980 54373419 Mtr7g3742 7 54367980 54373419 ECH
Mtr7g3742 7 54367980 54373419 Mtr1g2887 1 40089002 40091333 PCT