Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3724 ATGGGATGTGTGATTGGTCGCCAAGCCTCGTCAAACAAGGGTTCAGGTGCCCAAACTAACAGGATTAAGGTTGATGAAGCTTCTGCGGCGACGACAGCGAGTAACGGTGAGGAGAAGAATGTGGTAGAGATTGAGAATGATCAGAAGAAGAAGAGTGATGATAGTGTTCAACGCTCTCGAAGATCAAAGCCGAATCCAAGGCTAAGTAATCCACCTAAGCATTTACGTGGTGAACAGGTTGCTGCTGGATGGCCATCTTGGCTCACTGCTGTCTGTGGAGAAGCTCTCACTGGTTGGATTCCGCGAAAGGCTGACACATTTGAAAAAATCGATAAGATTGGGCAAGGTACTTATAGTAATGTGTACAAAGCTATAGACTCCATGACCGGTAAAGTTGTTGCTCTCAAGAAGGTTCGATTTGACAATTTGGAACCCGAGAGCATTAAATTCATGGCTAGAGAGATTATTATTCTGCGAAGGTTGGATCATCCAAATGTTATTAAGTTGCAAGGTTTAGTTACATCTAGGATGTCTTGTAGTTTGTATTTGGTGTTTGATTACATGGAGCATGATTTAGCCGGACTTGCTGCAAGTCCGGTAATCAGGTTTACGGAGTCTCAGATAAAATGTTACATGAATCAACTGCTATCGGGACTTGAGCATTGTCATAACCGTCGTGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGCTTGGCATCCTTTTTTGATCCAAACTATATGAATCCCATGACTAGTCGTGTAGTAACCCTTTGGTATCGGCCTCCTGAGTTGCTTCTTGGGGCCACAGATTACGGTGTGGGTATAGACCTCTGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGTCGGGAAACCAATTATGCCTGGCCGTACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGCGGTTCACCTTCTGATGAATACTGGAAGAAGTCAAAGTTGCCCAATGCTACATTGTTTAAACCTCGAGAGCCATATAAGAGATGCATAAGAGAGACATTCAAAGGTTTTCCACCGTCTGCTCTACCCCTTATTGATAAACTTCTTGCGATTGATCCTGTAGAACGGGAAACCGCCTCAGATGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATACCCCCCAAGCAAAGAAATGGATGCTAAAAGACGTGACGATGAAGTGAGGAGACAAAGAGCTGCAAGCAAAGCTCAGGTTGATGGCTCAAAGAAGCATCGTACTCGTGAACGTTCTATGAAAGCTATGCCTGCTCCCGAAGCCAATGCCGAGCTTCAATCCAATATTGATAGAAGACGTCTAATTACTCATGCAAATGCCAAGAGCAAGAGTGAAAAGTTCCCTCCACCTCATCAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCACATCATATTGATCCAGATACTATTCCTGCTGATATATCTTTCACTTCAACCACATATACCTATTCAAAGGAACCATTCCAAGCATGGTCAGGTCCAATTGGTAATGCTGCCGATATTGGAGTGTCGAAGCGAAAGAAATACACCGCAGGAGAGGCGTGGGATTTATTAAAACCGCATACAGGTGCCCCCAAAGATAAGTTTAAAGGAAAGGCAATTATAGCATAG 1710 0.4316 MGCVIGRQASSNKGSGAQTNRIKVDEASAATTASNGEEKNVVEIENDQKKKSDDSVQRSRRSKPNPRLSNPPKHLRGEQVAAGWPSWLTAVCGEALTGWIPRKADTFEKIDKIGQGTYSNVYKAIDSMTGKVVALKKVRFDNLEPESIKFMAREIIILRRLDHPNVIKLQGLVTSRMSCSLYLVFDYMEHDLAGLAASPVIRFTESQIKCYMNQLLSGLEHCHNRRVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNYMNPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLVGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKGFPPSALPLIDKLLAIDPVERETASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEVRRQRAASKAQVDGSKKHRTRERSMKAMPAPEANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDTIPADISFTSTTYTYSKEPFQAWSGPIGNAADIGVSKRKKYTAGEAWDLLKPHTGAPKDKFKGKAIIA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3724 569 SUPERFAMILY Protein kinase-like (PK-like) 101 398 IPR011009 -
Mtr7g3724 569 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3724 569 CDD STKc_CDK9_like 107 391 - -
Mtr7g3724 569 MobiDBLite consensus disorder prediction 409 446 - -
Mtr7g3724 569 MobiDBLite consensus disorder prediction 8 39 - -
Mtr7g3724 569 MobiDBLite consensus disorder prediction 40 61 - -
Mtr7g3724 569 PANTHER CELL DIVISION PROTEIN KINASE 52 541 - -
Mtr7g3724 569 Gene3D Transferase(Phosphotransferase) domain 1 190 431 - -
Mtr7g3724 569 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Mtr7g3724 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Mtr7g3724 569 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3724 569 MobiDBLite consensus disorder prediction 1 76 - -
Mtr7g3724 569 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Mtr7g3724 569 PANTHER OS01G0367700 PROTEIN 52 541 - -
Mtr7g3724 569 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3724 569 MobiDBLite consensus disorder prediction 398 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3724 Mtr-Chr7 54209434 54215112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3724 99 431 Core Cell Cycle Gene Families AT5G10270 52.436 1.25e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr7g3724 Pkinase 2.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3724 K08819 - gmx:100786837 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2909 1 40331109 40338384 Mtr7g3724 7 54209434 54215112 ECH
Mtr7g3724 7 54209434 54215112 Mtr7g3724 7 54209434 54215112 ECH
Mtr7g3724 7 54209434 54215112 Mtr1g2909 1 40331109 40338384 PCT