Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3709 ATGGCGAATGATGATCAGAAAGATTATTGTATATGGGACCCTAAAACAAGCCCTGCTTGCAGACTAAAGAAGATCTCAATTGAAGAAGCTTTTTTTAATGCTAAACACAAATCTGCTTCTGCCAAAGATTGCTTCAGTGGCTTGGATGGTAATAAACAATCTGAATTGCCTACCAGTTGTAAAAACTTGAGGGCAAGATTTCAATGGGACAAGGCATTGAAACTGTTGAAAAAAAGATCAATTAACAACACATCCTCCTGCCCTCCTTTTTGTGTGCCGATACCAAACACAGACGATCCTACTCTATCTAATTTAGACAACTTCAAATCTTCTTTGGTGAATTTCACTCTCTCTGAACTCAAAAATGCAACCCACAATTTTAGCAAAGAAAATTTAATTGGGAGAGGAGGATTCGCAGAGGTTTACAAGGGTCGCCTCTTAGATGGACAGCTGATAGCGGTTAAGCGGCTGAATAAAGGGACTTCAGATGAGAGGACATCAAACTTTCTATCTGAGCTAGGCATTATTGCTCATCTAAACCATCCTAACACTGCCAGACTTATTGGATGTGGTGTAGAAGGAGAAATGCACCTTGTATTTCAACTATCTCCATTAGGAAATTTAGATTCTCTTCTTCATGGTTCCAATAAAAACAAATTAGATTGGACTAGAAGGTACAGAATTATTGTGGGGATTGCTGATGGACTCCTATATCTTCATGAGAATTGTCAAAGGCGAATCATTCATAGAGATATTAAAGCAGAGAATGTTCTTCTCACAGAGAACTTTGAGCCTCAGATTTGTGATTTTGGACTTGCAAAGTGGTTACCAGAACAATGTAGCCACCATAATGTATCAAAATCTGAAGGAACATTCGGGTATTTTGCTCCTGAATATCTTATGCATGGCATAGTCGACGAGAAAACTGATGTTTATTCTTTTGGTGTCCTACTTTTGGAGATTATAACTGGCCGTAGGGCATTGGATCATTTGCACCAAAGTCTCGTGTTATCGGCAAAACCTTTGCTTGATGCTAATAACATCAAGGATCTTGTTGATCCTTCTCTTGGAGATGATTATGACCAAGAACAAATGGATCGTGTTGTTTTGACCGCGTCTCTATGTGTTGAGATCTCTCCTATCTTACGCCCTCGCATGAGTCAGGTTTCAATACTACTAAGAGGTGATGACTTTTTCCAGGAATTTGCAAATGAATGTCCAAGGCAGTCCCTCCAAAGAGCATACTCAGAGGATTATTGA 1260 0.3929 MANDDQKDYCIWDPKTSPACRLKKISIEEAFFNAKHKSASAKDCFSGLDGNKQSELPTSCKNLRARFQWDKALKLLKKRSINNTSSCPPFCVPIPNTDDPTLSNLDNFKSSLVNFTLSELKNATHNFSKENLIGRGGFAEVYKGRLLDGQLIAVKRLNKGTSDERTSNFLSELGIIAHLNHPNTARLIGCGVEGEMHLVFQLSPLGNLDSLLHGSNKNKLDWTRRYRIIVGIADGLLYLHENCQRRIIHRDIKAENVLLTENFEPQICDFGLAKWLPEQCSHHNVSKSEGTFGYFAPEYLMHGIVDEKTDVYSFGVLLLEIITGRRALDHLHQSLVLSAKPLLDANNIKDLVDPSLGDDYDQEQMDRVVLTASLCVEISPILRPRMSQVSILLRGDDFFQEFANECPRQSLQRAYSEDY* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3709 419 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 419 - -
Mtr7g3709 419 SUPERFAMILY Protein kinase-like (PK-like) 104 390 IPR011009 -
Mtr7g3709 419 ProSiteProfiles Protein kinase domain profile. 127 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3709 419 Gene3D Transferase(Phosphotransferase) domain 1 204 403 - -
Mtr7g3709 419 PANTHER OS08G0249100 PROTEIN 1 419 - -
Mtr7g3709 419 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Mtr7g3709 419 Pfam Protein tyrosine and serine/threonine kinase 130 337 IPR001245 GO:0004672|GO:0006468
Mtr7g3709 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Mtr7g3709 419 Gene3D Phosphorylase Kinase; domain 1 95 201 - -
Mtr7g3709 419 SMART serkin_6 127 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3709 Mtr-Chr7 54046419 54051829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3709 107 400 Receptor kinase-like Gene Family AT1G53420 43.137 2.35e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr7g3709 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3709 - - gmx:113001177 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2919 1 40458809 40463698 Mtr7g3709 7 54046419 54051829 ECH
Mtr1g3264 1 43948390 43951784 Mtr7g3709 7 54046419 54051829 ECH
Mtr2g0694 2 7058966 7062481 Mtr7g3709 7 54046419 54051829 ECH
Mtr7g3709 7 54046419 54051829 Mtr7g3709 7 54046419 54051829 ECH
Mtr7g3709 7 54046419 54051829 Mtr1g2919 1 40458809 40463698 PCT