Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3699 ATGTGTTTACCAGAGGAAAATAGAGAAAGAGAGAGATCCATGGCGCTAGAACCAACTCTACTATATCCACAAGACCCTTTCACCTATGGATTCAACAAAGACCACTACAATTACAACCTTTTAACAGATTCTGAAGCAAACTTTGACTACACCAATTTCAACCTTCAAAATGAAGAACAAGGTTTTGTTTCTACTTTTCTCAAGAACCAACAAACAGAGAATTATCCTTATGAAAATTGGAGTAACAATTGTCCATCTTTAGATAGTTCAATTTCAACTCGTTCTCGTTCCAAGAAACGCAGAGTCAAAACAAGTAAGAATAAGGAAGAAATTGAGAATCAGAGAATGACTCACATTGCTGTAGAACGCAACAGGAGAAAGCAAATGAATGAGTATCTCTCTGTTCTTAGATCTCTCATGCCTGAATCCTACGTCCAAAGGGGTGATCAAGCATCAATTATTGGGGGTGCTATTAACTTTGTTAAGAAGCTTGAGCAGAAGCTACAATTTCTTGGTGTACAAAAACAAAAGGAGGGTAAATTTGATACTATTGTTGAAAATAAAAACAAGCCCTTTTCTGAATTTTTTACCTTTCCACAATACTCAACAAGTGACGGTGTGTGTGAGAGTTCTGAGACAAAAATGGGTGGTGAGGTTCAATCTCGCAATATTGCTGATATTGAAGTTACAATGGTTGAAAGCCATGCAAATCTCAAAATAAGAACAAAGAAAAGACCAAAACAGCTCTTGAAGATGGTTTCTAGTTTGCATGGATTGTGTCTCACAATCTTGCACCTTAATGTCACTACAGCTGATGAATTTGTCTTCTATTCTCTCAGCGTTAAGGTTGAAGATGATTGCAAGCTTGGATCAGTGGATGAGATAGCTGCAGCTATATACCAAATATTGGAAAGTATTCAACAAGAGTCATCAATCAATATATTGAATTAA 951 0.3638 MCLPEENRERERSMALEPTLLYPQDPFTYGFNKDHYNYNLLTDSEANFDYTNFNLQNEEQGFVSTFLKNQQTENYPYENWSNNCPSLDSSISTRSRSKKRRVKTSKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKKLEQKLQFLGVQKQKEGKFDTIVENKNKPFSEFFTFPQYSTSDGVCESSETKMGGEVQSRNIADIEVTMVESHANLKIRTKKRPKQLLKMVSSLHGLCLTILHLNVTTADEFVFYSLSVKVEDDCKLGSVDEIAAAIYQILESIQQESSINILN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3699 316 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 14 313 - -
Mtr7g3699 316 PANTHER MAX DIMERIZATION, MAD 14 313 - -
Mtr7g3699 316 SMART finulus 119 170 IPR011598 GO:0046983
Mtr7g3699 316 MobiDBLite consensus disorder prediction 86 109 - -
Mtr7g3699 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 113 175 IPR036638 GO:0046983
Mtr7g3699 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 164 IPR011598 GO:0046983
Mtr7g3699 316 Gene3D - 96 179 IPR036638 GO:0046983
Mtr7g3699 316 Pfam Helix-loop-helix DNA-binding domain 114 165 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3699 Mtr-Chr7 53954200 53955731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3699 14 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 47.020 1.52e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g3699 HLH 8.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3699 - - gmx:100782243 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3699 7 53954200 53955731 Mtr7g3699 7 53954200 53955731 ECH
Mtr7g3699 7 53954200 53955731 Mtr1g2930 1 40534874 40536531 PCT