Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3698 ATGAAGAAAGATCCAACCAATTTATTCATCCTCTTTGGAATCCTTCTTCTCTCAATCACAAAAACCCAATCCCAAGCTACTAACGATAACCCCACAAATCCAAATTTCAACCAAGAATTTAACCCTTCCTTCGCTATAATCATAGTCATTTTAGTAGCTGCTCTTTTTCTCATGGGCTTTTTCTCCATCTACATCCGTCGCTGCTCCGATTCACCTTCCTCCAACAACCTCCTTCTCCCCATCACCAACGGCCGTAGAGCGGTGGCGCGTGGACTCGATCCATCAGTAATCGAAACTTTCCCGATTCTTGAATACTCCGAAGTCAAGATCCATAAGATCGGAAAAGATGTTCTTGAGTGTGCCGTTTGTTTAATGGAATTCGAAGATACTGAAACGCTGCGTTTGATTCCAAAGTGTGATCATGTTTTTCACCCTGAGTGTATTGACGAGTGGTTATCTTCTCACACAACGTGTCCCGTTTGTCGCGCGAATCTCGTTCCACAACCTGGTGACTCAGTTCACGGCGTTCCTGAGTCACAGCAACAAGACGTTGAAGCTCAAAACGACGCGGTTCAATTACCGACGGAATCTGACTCAGTATTACTTGCTCCAGAAGTGATTTCGTTGAATAAAACACTGAACCGGAACCGTACGCGTGGATCTCAATCAAACCGGCCGCGTCGTTTTCCACGGTCTCACTCGACCGGACATTCTTTAATCCAACCGGGTGAAAACACGGACCGGTTCACTTTGAAACTGCCTAATAAGGTTAGGAAACAGATAATGAGCCGGCAATTGCAACGAGCGAGAAGTTTGATTACGTTACCAAGAGAAAGTAGCTCAAGACATGGCTACCGAACCGGAGGTGAAGGAAGTAATAGAGGAAAAAGTTTGAGGCGGTTGGACCTGAGTTTTAAATCAGACCGGTGGATATTTAATAGAGCACCGTCGTTTTTAGCAAGGGCATTGTCGTTTAGGTCTCCAAAGCCAAAAGTCAATAATAGCGATGATGATGAAGGAACTTCTTCTGCAGCTGCTCCTATCATGCCATCCTCTGCTGTTGACTCTGCACGCCCTCAGATTTGA 1086 0.454 MKKDPTNLFILFGILLLSITKTQSQATNDNPTNPNFNQEFNPSFAIIIVILVAALFLMGFFSIYIRRCSDSPSSNNLLLPITNGRRAVARGLDPSVIETFPILEYSEVKIHKIGKDVLECAVCLMEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGDSVHGVPESQQQDVEAQNDAVQLPTESDSVLLAPEVISLNKTLNRNRTRGSQSNRPRRFPRSHSTGHSLIQPGENTDRFTLKLPNKVRKQIMSRQLQRARSLITLPRESSSRHGYRTGGEGSNRGKSLRRLDLSFKSDRWIFNRAPSFLARALSFRSPKPKVNNSDDDEGTSSAAAPIMPSSAVDSARPQI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3698 361 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Mtr7g3698 361 MobiDBLite consensus disorder prediction 326 361 - -
Mtr7g3698 361 CDD RING-H2_EL5_like 119 162 - -
Mtr7g3698 361 MobiDBLite consensus disorder prediction 211 249 - -
Mtr7g3698 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 167 IPR013083 -
Mtr7g3698 361 Pfam Ring finger domain 119 162 IPR001841 -
Mtr7g3698 361 MobiDBLite consensus disorder prediction 277 296 - -
Mtr7g3698 361 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 300 - -
Mtr7g3698 361 SMART ring_2 120 161 IPR001841 -
Mtr7g3698 361 PANTHER RING FINGER DOMAIN-CONTAINING 1 300 - -
Mtr7g3698 361 MobiDBLite consensus disorder prediction 337 361 - -
Mtr7g3698 361 SUPERFAMILY RING/U-box 119 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3698 Mtr-Chr7 53932589 53934114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3698 8 322 Rapid Response to Elicitors AT3G05200 46.914 3.27e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3698 K10664 - gmx:100781706 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3698 7 53932589 53934114 Mtr7g3698 7 53932589 53934114 ECH
Mtr7g3698 7 53932589 53934114 Mtr1g2931 1 40579470 40580926 PCT