LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g3684	ATGGAAGAAGATCGAGTAATTGATATGCTTACTGAAAAGTTCAATCGCTTTGTCATTCACTGCAATTTCAACTCTGCACCAGAGCAATTGAACGAAACCTCTGACAGCATGGATGAGAATACTATGTCAACTCAGGACGGTCATACACTCCCAGTATTGAAGAAAATTCTTGACCTAAGTTCCAAAGCTCAGAATTTGAAGAAACAGCATGTAGCCCTTAGCGAACAAGTGAAACTTGCATTTGAGTCCTTTCCTGGTCTAGATTTTTTAAAGTCTGTTCAGCTTATAGGTGATGAATATGAAATTTTAAAAAGAAAGTACCTAGAGGTGTCCTTGGAGCGAAGGAGGCTTAACAATGAAGTGATTGAACTCAAGGGAAATATCAGAGTTTTCTGTAGATGCAGACCATTAAATGAAAATGAAATTGCAAATGGATCGGCAGTATCTGTTGTCAATTTTGAGTCAAATTCTGAGGAGCTTCAAGTTGTTTGTTCCGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTCAAACCTGAAGATAATCAAGAGGCTGTTTTTGCACAGACAAAACCTATTGTTGCATCAGTACTAGATGGCCACAATGTTTGCATTTTTGCATATGGGCAAACCGGAACTGGTAAGACTTTCACCATGGAAGGAACACCAGAGCATAGGGGAGTTAACTATAGAACTCTTGAGGAATTATTTCGGGTTTCTGAAGAGAGACAAGGCACAATAAAATATGAACTGCTTGTTAGTATGTTGGAGGTTTACAATGAAAAGATAAAAGATCTCTTGGCCGGAAATTCTTCTGAAGCCACTAAGAAGTTGGAGGTCAAGCAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTTGTTGAAACACATGTTTATGGAGCAGATGGTGTTTGGGAAATTCTGAAGTCTGGAAACAGAGTCAGATCAGTTGGTTCCACAAGTGCTAACGAGCTTAGCAGTCGTTCTCATTGTTTGGTGCGGGTAACTGTTATGGGGGAAAATTTAATCAATGGCCAGAGAACAAAAAGTCACCTTTGGTTAGTTGACTTAGCTGGCAGTGAGCGTGTAGGGAAAACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAGTTCATAAATAAGTCTCTATCATCACTTGGTGATGTTATTGCAGCCCTTGCTTCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACTCATATACTTCAGAGCTCGTTAGGAGGTGATTGCAAAACTCTAATGTTTGTCCAAATAAGTCCTAGTTCAGTAGACTTAACAGAGACACTTTGTTCCCTAAATTTTGCTACGCGTGTTCGAGGAATTGAGAGCGGTCCAGCCCGAAAGCAAGTAGACCTCACTGAGCTCTTGAAGTACAAGCAAATGGCTGAAAAGTCCAAACACGATGAAAAGGAAGCCAGGAAATTACAAGATAACTTGCAGTCCGTACAAATGAGACTAGCCACGAGAGAATTCATGTGCCGAAATCTTCAAGACAAGGTTCGGGATCTCGAGAACCAGATTGTGGAGGAGAGAAAAACCAGATTAAAGCAAGAAAGTCGATCACTTGTTGCCGAGAAAACAATAAAGAGGACATTACTGATTCCTTTGGAAAGACCTCCACTGAGAAGAATTAATGATTCCTTGCCTCCACCACCCGAGAGAAGGCCCTCCTCATGCAGCTCTTCGTTACAGGGAAAGGAAAACAATGTCAGAACGAATTTAATGACTACAAGAAGAAGAGTATCCATTGCTGCAAGACCACCGGCTGCACCTTCGCAAGCACAGCCTCTTCAGCCTAGGAGGCGAGTTTCCCTGGCAACACTCAAACCCGAAACAACTTCTTCTCAATTGACCAATGGAAGCAACGACCACCAACCGATGGTAAGGAACCAAAGAAAAGCTCGGTATTCAAGGTTGTTCGCCCCATTAACAACATCAGCAATTGAGACAACCCCAACTTTGGATAAGAGCAGCAGCAGTAGGTTTGATGGCAGTCCAACACAGGCGGCAGATTCGCGGATGATGGCTAGGCATCCACACCCAGCTGTGATTGCACTGCAACGCAAATCTTTGGTATGGAGTCCTCTCAAACGGAGAGGTATCGAAAGTAGTAGAAAGGCATCATTCTTGCCATCTCGGCCTTCCACCCAAATGCGATGA	2190	0.426	MEEDRVIDMLTEKFNRFVIHCNFNSAPEQLNETSDSMDENTMSTQDGHTLPVLKKILDLSSKAQNLKKQHVALSEQVKLAFESFPGLDFLKSVQLIGDEYEILKRKYLEVSLERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFESNSEELQVVCSDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEVKQAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHCLVRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSSLGDVIAALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLTELLKYKQMAEKSKHDEKEARKLQDNLQSVQMRLATREFMCRNLQDKVRDLENQIVEERKTRLKQESRSLVAEKTIKRTLLIPLERPPLRRINDSLPPPPERRPSSCSSSLQGKENNVRTNLMTTRRRVSIAARPPAAPSQAQPLQPRRRVSLATLKPETTSSQLTNGSNDHQPMVRNQRKARYSRLFAPLTTSAIETTPTLDKSSSSRFDGSPTQAADSRMMARHPHPAVIALQRKSLVWSPLKRRGIESSRKASFLPSRPSTQMR*	730

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g3684	729	SMART	kinesin_4	125	459	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	Coils	Coil	468	535	-	-
	Mtr7g3684	729	PRINTS	Kinesin heavy chain signature	201	222	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	PRINTS	Kinesin heavy chain signature	321	338	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	PRINTS	Kinesin heavy chain signature	352	370	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	PRINTS	Kinesin heavy chain signature	401	422	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	Coils	Coil	56	76	-	-
	Mtr7g3684	729	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	127	486	IPR027417	-
	Mtr7g3684	729	MobiDBLite	consensus disorder prediction	658	677	-	-
	Mtr7g3684	729	ProSitePatterns	Kinesin motor domain signature.	351	362	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Mtr7g3684	729	Pfam	Kinesin motor domain	133	451	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	MobiDBLite	consensus disorder prediction	567	589	-	-
	Mtr7g3684	729	Coils	Coil	100	120	-	-
	Mtr7g3684	729	MobiDBLite	consensus disorder prediction	551	612	-	-
	Mtr7g3684	729	PANTHER	KINESIN-LIKE PROTEIN KIN-14S	66	720	-	-
	Mtr7g3684	729	MobiDBLite	consensus disorder prediction	658	686	-	-
	Mtr7g3684	729	Gene3D	Kinesin motor domain	122	494	IPR036961	-
	Mtr7g3684	729	ProSiteProfiles	Kinesin motor domain profile.	127	451	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mtr7g3684	729	PANTHER	KINESIN-RELATED	66	720	IPR027640	GO:0003777\|GO:0007018

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g3684	Mtr-Chr7	53810347	53815104	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g3684	99	472	Calmodulin-binding Proteins	AT5G65930	40.909	7.65e-75	261

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g3684	K10406		-	gmx:100788477	941.799

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr7g3684	7	53810347	53815104	Mtr7g3684	7	53810347	53815104	ECH