Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3673 ATGTCAGATTCAGAGTCAAATTCAGATGTTTTCAGTGTTCGAATTGTCTCCGTAGACCATTACATGGCATCGCCAATCCCATCCATCGATATCTCTCACAGCACCTTCCATCGTGGAAAAGTGAACGAAGTTCCTGTAATTAGAGTTTATGGTTCTACTCCTGCTGGCCAGAAAACTTGCCTGCACATTCATGGAGCTTTGCCTTATTTATATGTGTCGTGTTCAGATATACCACTCCAACTAGACCAAGAAGGTGATGCATACACCTACATGGTAGCTTCTTCTCTCGAGAAAGCCTTGAAGCTTAAAGGCAGTGCTGATTCATCGAGACAACATGTACATGGCTGCAGCCTTGTCCGAGCAAAGAAATTTTATGGCTATTGCTCATTTGAAGAGTTTTTTGTAAAGATTTACCTATATTATCCTCAAGATGTCTCTCGTGCAGCAAATCTTCTCTTGGCTGGTGCTGTTCTTAATAAAAGTTTACAGCCTCACGAATCACATATTCCCTTTATTCTTCAGTTTCTGGTTGATTACAACTTGTATGGCATGGGTCATTTACATCTATCAAAGATGAGGTTTCGCCATCCCATGCCGGATTCTATTCACAAGAAGTCAGACATCAATAGCCAGCACAGAAAGGCAGATCCAGGTGCTGAGGCATGTTTAGAGTCAAAAATATGGATGTCTTCCACGATCTCATTCGACTGGATGTGGTCACTCCCTAGTGAATCTGGTGGTTCATCAAATGACAACACTCACAGTCCTAAGCGTCAAAGCATCTGTGAGCTTGAAGGAGATATTTCTGTAGATGAGATTCTTAATCAGCAGTTTAAAATGTTTTCATCTCTCTCACAAACAAGCTCAAATGTCAACATGGTTCAGTCACTTGTATCAATATGGGAGGAACAGCGAAAACGGTCGGGGATTCACGAGGCTACGATGCTTTCTGATTCTGGTAAACCACTACCAGAAGATGTCATGAAACTTCTCTCTTCTGGTCTTGACTTTGAGAAAAAACTTATTCAATTGTGCAGTGAATCCGACACCACTTTATCTTGCACTCCTTTTGAGAAGGAACTCAGAGAAACAGACATAATAGGCTCAGCATCGCCACCAGCTTCATTGTGTGAAAATGCCAAATTGCTTGAGGAAGGGACCGACACAAGTCTCAAGTTGTTGAAAATTGGTCAAATGCAATCAGCTGAAAAGATTGAAATGTTGGACATAAAGGATGCTGATATGGAAGCACAAAATCTTCTTAAGTGGCTTGCAACTTCTCAAGCTGCAGAGGATATAAACTCTGATGATGAACTTGCTTGTGAAACAATCTTGAGTCCCTTGCCACCTGCTGCAACAATTGATAAGATGCTGGAGAAAGCAAATATGGCTTATGAGAGTGAGTCCCAGCAGGAGTGTCAAGATATTCTAGATTCAATTGATGATATGCTTGCGTTAGACCTGCCAAAAAAAAAGCCTTCTCGTTCCTTTGATCACAATTGTCCTATTGAAGCTTCATCCGACAATATGATACCTCAAGTTGATGGTTCTAACGATGATGAATTCTCAAGTCCATGTGCTAGTTTGGCTGAAATCTCTTCTGCAGTTGAGATAAACAGTGAATACAAAAGAGCTTCTGAGAACCACTTACTGCACAATACTGACACAAGTACAGTCAATACAGATAAAAGAAATAGACAATGGGGGTCTTTGCCTTTTTCCATGACCGGGAAGGTTAATAATGATGGAGAGCATGCTACCTCACAAGTGGCTCATCTGTTTGAACGAGAAACCGAGGATTCTTCTCTGTCAGATTACTTAACCAGGAATGAGATTAAAAATAATAAATATATTAAAAGAAATGTTGGAGAAGGTGCCTCAGATTCAAAAGAAGTGCATAGTTTGGTTAACTGCTCGTTAAGGGACTTGATGAGGAGAAAGCGATCCTATCGAGTTGAACATGATGAACGAGAATCTGGAACTGCAAAGAAGCTTAATTTGGACAGGCATGGGGGGACAAAAACGTGCCTTTGGCCAAAACTTGAATTGGAAACAATGCAAACCGATGAAGTAGAAAAAGAACTCCAAAAAAATTCTGATCATGAAGTGAGAAGTCGTGATAATTTAGTGTGTCGGAAACAGTCATTTCCATCTGACAGTGACAGTTTTTTGAATATATCTAAAGATGAATGTTTAGTTCAACATGAAAGGCATTATCTAGAAGCAGGTATGGTGTTGAAGAACTCTGCAAATCAAAGTTCTTCTTCAATGCATGAAAGGCCGGTCCTGCTTGAAACTTCACATTTGGCTGATTCCATAGACAAATCTGTGGCTTGCAGGGAGAAAAACACCAAGGATAGAACAACTTATGAAAAACATGCAGCTTCTGATGCCTATACCCCAAATCCTTCTTTAGACACTCATTTGAGAACTGACGATGATCATAAAGTCAGAGCTCCTGAGAGGTGTCAGGAAACTGATTCTGTTGCTTCAGGTAGTAGACAAAACTCATTAGTCGATGACGAAGTGTCGGGCAAAAGTAAGTGCATTGATAAAACTTCTAGTGGTAGCATATTTTTTGTGCAGCATGATCAGATGAAGTCTTACGAGCATGCTGTGGGAAAAAGTGCTGCAAGTGATACAAGAGTATTGCTCACTGATAAGGTTGATAATCAAAAGCTGGATAAAAATTTGCTGTGTAAGACTGTTGGCTCAGAACCCATTGTTGATGACCTGAAGAGTAATCACATGAAATTAACTAAAGTGGTCATAGGCAATAGCTCTTTGGTTGACAAGAATCTTAAAAGTCATTTGTCCTTGCCAACCTTCCCGAATAATTTACATTTGGATGAGGATGATGAAATGCCAGGCAACGCTCTGGATGTATTTCTTCCTATTTCTGCAAGGAATTCCCAGAAACAGAAAAAACCTTGGAACAAGTGTGTTACTATTGAAACCCCCAGATCCTCTGGGACAAAAGGCGTTTCCACTTACTATCAAAATGATGGCTCTCACCTATACCTATTAACACCTAATATTTTGCCTCCTTCTGCCGGTTCTGTGCAAAGATGGCTATTTTGTGATGAGAGAGAACCTGATGCGGAGGACCAGGATGTACCTAAATGCACGTCTGGGCCTCTTAGGCATACTCCTGATCAAATGCGTCAAGAACCTGGTGCAAAGGACAAGGACATATCTAAATGCGCCTCTGGACCTACTCTTAGGCCTGAGCTGCATCAAGATACAGAGAAGAAGCTTCCATGCATTAACGAAGGACAAACAGAAAGAATAAAAGCACATATGGATCACTCTCAAGATATTTCTCAGATATCAGGCCCTGGTGAGAAATCAAGTTTTACCCCTCTAAGTCAAATTGGATTTCAGGATCCGGCAAGTGCTGGCCATGGACAACAATTGGCATTACTTAGTATAGAGGTGCTTGCAGAATCTAGAGGAGACCTTTTACCTGATCCTCAATTTGATGCCGTAAATATTGTAGCTCTTGGTTTTCAGAAAGATTGTGATGCTACTGTTGAAGTTCTAGTTCTTTTGCATAGTAAATTTGTACCTTGTCAGAGAAGTCTTGATGGTCTATCAGACTGCAAAGTACTGAACTTCACTGATGAAAAGCACTTGCTTAAAGAATTTACAAAGATTGTGTCTTCATCTGACCCAGATATATTGATGGGTTGGGAAATTCAAGGGAGTTCTCTTGGTTTTCTAGCAGAAAGGGCTTCACATCTTGGTTTTGGATTACTTAATGATTTGTCTCGCACTCCATCTAATTCTTGGATTAATTCTCAAGACATCAAAACATCTGAGAAAAGTATCTTGGAACCGGACATCCCAGATACTACCAGTCTAGATTGTTGTGCACGAGAAAGTTCAATAATTGAGGATGAGTGGGGACGGACACATGCTAGTGGAGTTCATGTAGGTGGAAGAATTGTCCTTAACTTATGGAGATTGATTCGTGGAGAAGTTAAGCTGAATTTGTATTCAGTTGAAGCTGTTGCTGAAGCTGTATTGAGGCGGAAAGTTCCTTCACTTAACCACAATGTGCTGACAAAGTGGTTTTCAAGGGGTCCAGGGCAAGCAAGATATCAGTGTATCAAATATATTGTGGATAGAGCAAAGCTGAACCTGGAGATATTAAACCAACTTGATATGGTGAATCGAACATCAGAACTTGCTCGCGTCTTTGGAATAGACTTCTTTTCTGTTCTTTCTCGAGGCTCACAATACCGTGTTGAATCCATGTTTTTGAGGTTGGCCCACACACAAAACTACGTTGCTATCTCGCCTGGAAATCAACAGGTTGCTTCTCAACCTGCCATGGAATGCCTTCCCCTAGTAATGGAACCAGAGTCAGGATTTTATTCAGATCCTGTTGTTGTACTTGACTTCCAATCTTTATATCCGTCAATGATAATTGCATACAACCTTTGCTTTTGCACATGTCTTGGCAAAGTTGTGCCATCAAAGACTAATACACTTGGGGTTAGTCCATTTGTACCGGAGCAACATATTCTTCAGGATTTAAAAGATCAAATCTTGCTCACTCCAAATGGTGTTATGTTTGTACCTTCCAAGATTCGAAGAGGTGTACTTCCCCGTCTATTGGAAGAAATTTTATCAACTAGAATAATGGTAAAACAAGCAATGAAAAAGTTGTCTCCTTCAGAGCAAGTCCTTCAGCGGATATTTAATGCAAGACAGCTTGCTTTGAAGCTCATATCAAATGTAACATACGGTTATACTGCTGCTGGATTTAGTGGTCGCATGCCCTGTGCAGAACTTGCAGACAGCATTGTTCAATGTGGACGCTGTACACTGGAAAAGGCTATATCTTTTGTAAATCTACATGAAAAGTGGAATGCTAAAGTTATTTATGGAGATACTGATAGTATGTTTGTCCTTCTTAAAGGACGCACTGCCAAAGAGGCCTTCCAAATTGGTAGTGAGATTGCTTCTGCTATCACTGCTATGAATCCTAGTCCTGTCACCTTGAAGATGGAGAAAGTTTATCACCCATGTTTCCTCATTACTAAAAAGCGATATGTTGGCTACAGTTATGAGAACCCCAATCAAATTGAACCTGTTTTTGATGCCAAAGGTATTGAAACAGTACGCAGGGACACATGTGAAGCAGTTGCAAAGATAATGGAGCAGTCTTTGAGACTTTTTTTTGAGCACCAGAGTTTATTGGAGGTGAAGACTTATTTGCAGCGTCAATGGAAGAGGATTCTTTCAGGCAGAGTTTCCCTCAAGGATTTTATCTTTGCAAAGGAGGTTCGCTTGGGTACCTACAGTGCAAGGATCTCGTCACTTCCTCCTGCTGCAATTGTGGCAACGAAGGCTATGAGGGTTGATCGTAGGGCTGAACCACGTTATGCAGAGAGAATACCTTATGTTGTAATCCATGGAGAGCCTGGAGCCCGCCTAGTTGATATGGTTGTGGATCCATTGGAAGTTTTGGCAATTGATTCACCATTCAGAATAAATGATTTATATTACATTAATAAACAAATAATACCGGCTTTACAGCGAGTATTTGGGCTTGTTGGTGCTGACCTGAACCAGTGGTTTGCAGAGATGCCTCGTCCTGTAAGAGAAGCTTCTGTAAAGCATGCATTCACTCCAAACTTCCAACGGACCAGAATTGATTATTACTATCTCTCAAAACATTGTGTACTCTGTGGTGGGTTGGTCCAGGCATCAGCCCGTTTATGCAGTCAATGTTCTGAAAATGAGGTGGCTGCTGCAACAGCAGTGATTGGTAAAACTGCAAAGTTGGAGCAAGAGATGCAACACCTTGTATCTATATGTCAACATTGTGGAGGCGGCGATAGGCTTCTCGAAAGTGGTGTGAAGTGCACTTCGATTTCGTGCCTGGTGTTTTATGAGAGGCGAAAAGTTCAGAAAGAGCTACTAGCAGCCACCCATGTTGCTGCAGATAAAGGCTTCTATCCAAGATGCACGGTAGAATGGTTTTGA 5997 0.4105 MSDSESNSDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHLHLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGGSSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLCSESDTTLSCTPFEKELRETDIIGSASPPASLCENAKLLEEGTDTSLKLLKIGQMQSAEKIEMLDIKDADMEAQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKANMAYESESQQECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDEFSSPCASLAEISSAVEINSEYKRASENHLLHNTDTSTVNTDKRNRQWGSLPFSMTGKVNNDGEHATSQVAHLFERETEDSSLSDYLTRNEIKNNKYIKRNVGEGASDSKEVHSLVNCSLRDLMRRKRSYRVEHDERESGTAKKLNLDRHGGTKTCLWPKLELETMQTDEVEKELQKNSDHEVRSRDNLVCRKQSFPSDSDSFLNISKDECLVQHERHYLEAGMVLKNSANQSSSSMHERPVLLETSHLADSIDKSVACREKNTKDRTTYEKHAASDAYTPNPSLDTHLRTDDDHKVRAPERCQETDSVASGSRQNSLVDDEVSGKSKCIDKTSSGSIFFVQHDQMKSYEHAVGKSAASDTRVLLTDKVDNQKLDKNLLCKTVGSEPIVDDLKSNHMKLTKVVIGNSSLVDKNLKSHLSLPTFPNNLHLDEDDEMPGNALDVFLPISARNSQKQKKPWNKCVTIETPRSSGTKGVSTYYQNDGSHLYLLTPNILPPSAGSVQRWLFCDEREPDAEDQDVPKCTSGPLRHTPDQMRQEPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEKSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCDATVEVLVLLHSKFVPCQRSLDGLSDCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKTNTLGVSPFVPEQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHVAADKGFYPRCTVEWF* 1999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3673 1998 Gene3D Palm domain of DNA polymerase 1450 1695 IPR023211 -
Mtr7g3673 1998 Gene3D DNA Polymerase, chain B, domain 1 29 196 - -
Mtr7g3673 1998 Gene3D - 1706 1871 IPR042087 -
Mtr7g3673 1998 Pfam C4-type zinc-finger of DNA polymerase delta 1897 1970 IPR025687 -
Mtr7g3673 1998 PRINTS DNA-directed DNA-polymerase family B signature 1464 1477 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mtr7g3673 1998 PRINTS DNA-directed DNA-polymerase family B signature 1573 1585 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mtr7g3673 1998 PRINTS DNA-directed DNA-polymerase family B signature 1629 1637 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mtr7g3673 1998 SUPERFAMILY DNA/RNA polymerases 1451 1864 IPR043502 -
Mtr7g3673 1998 Gene3D - 1164 1447 IPR036397 GO:0003676
Mtr7g3673 1998 MobiDBLite consensus disorder prediction 807 823 - -
Mtr7g3673 1998 Pfam DNA polymerase family B 1405 1852 IPR006134 GO:0000166|GO:0003677
Mtr7g3673 1998 ProSitePatterns DNA polymerase family B signature. 1631 1639 IPR017964 GO:0000166|GO:0003676
Mtr7g3673 1998 SMART polmehr3 1137 1643 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mtr7g3673 1998 Gene3D Helix hairpin bin 1530 1590 - -
Mtr7g3673 1998 SUPERFAMILY Ribonuclease H-like 27 1410 IPR012337 -
Mtr7g3673 1998 CDD DNA_polB_zeta_exo 1136 1386 - -
Mtr7g3673 1998 CDD POLBc_zeta 1412 1860 - -
Mtr7g3673 1998 MobiDBLite consensus disorder prediction 826 842 - -
Mtr7g3673 1998 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 7 1991 IPR030559 GO:0006281|GO:0016035|GO:0019985
Mtr7g3673 1998 MobiDBLite consensus disorder prediction 782 843 - -
Mtr7g3673 1998 Pfam DNA polymerase family B, exonuclease domain 55 195 IPR006133 -
Mtr7g3673 1998 Pfam DNA polymerase family B, exonuclease domain 1198 1291 IPR006133 -
Mtr7g3673 1998 MobiDBLite consensus disorder prediction 1031 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3673 Mtr-Chr7 53717742 53732498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3673 1131 1980 Core DNA Replication Machinery Family AT5G63960 28.362 6.43e-88 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3673 K02350 - gmx:100777934 2952.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3673 7 53717742 53732498 Mtr7g3673 7 53717742 53732498 ECH