Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3647 ATGAGTCGTGGTAGTGCAGCTGGTGCCAAGGGAAAGAAGAAGGGTGCAACCTTCACCATTGACTGTGCTAAGCCAGTGGAAGACAAGATCATGGACATTGCTTCTCTTGAGAAGTTTCTTCAAGAGAGGATCAAGGTCGGTGGAAAAGCTGGTGCTCTCGGTGATTCTGTCTCCGTTACCCGTGAGAAGAGCAAGATCACTGTTACCTCTGACAGTAACTTTTCCAAGCGATACTTGAAGTATTTGACAAAGAAGTACTTGAAGAAACACAATGTAAGAGACTGGCTCAGAGTGATTGCTTCAAACAAAGATAGAAGTATCTATGAGCTCAGGTACTTCAACATTGCTGAGAACGAGGGAGAGGAAGAAGATTGA 375 0.4453 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3647 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mtr7g3647 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Mtr7g3647 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mtr7g3647 124 Gene3D - 5 124 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3647 Mtr-Chr7 53439187 53441356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3647 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 1.62e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3647 K02891 - jre:109012705 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3647 7 53439187 53441356 Mtr1g2979 1 40987289 40989472 PCT