Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3635 ATGTCTGGGGGAGGAGATGCTAAGAGGAATAAGAGACTCGCCATAATTGGTGTCTCTACCTTCTTATTAGTTGCTATGGTTGTCGCCGTCACAGTTAACGTAGGCTTTAACAACAAAAAGGAACCTGGAGAAGAAACTTCAAAAGAGTCACACGTATCTCAATCGGTAAAAGCCGTCAAAACACTTTGCGCGCCAACGGATTACAAAAAGGAATGTGAGGACAGTCTCATAGCACATGCTGGCAATATAACTGAGCCAAAAGAACTCATCAAGATCGCTTTCAACATAACCATTGCAAAAATCAGTGAAGGACTTAAAAAAACTCATCTCCTTCAAGAGGCTGAAAAAGATGAAAGAACTAAACAAGCACTTGATACATGTAAACAAGTCATGCAGCTTTCCATTGACGAATTCCAAAGGTCACTAGAAAGGTTCAGTAACTTTGACCTTAATAGCCTCGACAGAGTCCTCACGAGTTTGAAAGTATGGTTAAGCGGTGCCATCACATACCAAGAAACATGTTTGGATGCTTTTGAGAATACTACAACCGATGCTGGTAAAAAAATGAAAGAGGTTTTGCAAACTTCTATGCATATGAGTAGCAATGGTCTTTCCATTATTAACCAACTTTCCAAAACATTCGAAGAGATGAAACAACCTGCTGGTCGTCGTCTTTTGAAGGAAAGTCTTCCTGAGTGGGTTGATGACCGTGCCGGTGTTAGGAAACTTCTTAATAAAATGACTGGAAGGAAACTTCAGGCTCATGTTGTTGTTGCTAAGGATGGAAGTGGAAATTTCACCACAATCACTGAGGCTCTTAAGCATGTTCCCAAGAAAAACTTGAAGCCATTTGTTATTTACATCAAGGAGGGTGTTTATAAAGAGTATGTTGAAGTTACTAAAACCATGACTCACGTTGTTTTCATCGGTGATGGTGGTAGAAAGACACGCATTACGGGCAATAAAAACTTCATTGATGGAGTTGGTACCTTCAAAACCGCTAGCGTTGCTATTACTGGAGATTTCTTTGTTGGCATTGGTATTGGTTTTGAAAACTCTGCTGGACCAGAAAAGCATCAAGCAGTTGCCTTGAGAGTCCAATCTGACAGATCAATTTTTTACAAATGCAGAATGGATGGTTACCAAGACACACTTTACGCTCACACCATGCGTCAATTCTACCGTGATTGTATTATCTCAGGTACCATTGACTTCGTCTTTGGTGATTCCATTGCTGTTCTCCAAAATTGCACTTTTGTCGTCCGAAAGCCATTGGAAAACCAACAATGCATTGTGACTGCACAAGGTAGGAAGGAAAAAAACCAACCAACAGGATTAATCATCCAAGGAGGTTCAATTGTGGCAGATCCCAAATACTATCCAGTTAGACTCAAGAACAAAGCTTACTTGGCTCGTCCATGGAAGGATTTCTCAAGAACTATCTTTTTGGATACATATATTGGTGATATGATCACACCTGAAGGTTATATGCCATGGCAAACACCAGCAGGTATCACAGGAACTGACACTTGTTACTATGGTGAGTACAATAACCGTGGTCCTGGTTCCGATGTTAAACAGCGTGTAAAATGGCAAGGTGTTAAGACTATTACTTCAGAAGGAGCAGCTAGTTTTGTGCCAATTAGGTTCTTCCATGGAGATGATTGGATTAGGGTAACTAGAGTTCCTTATTCTCCAGGAGCGACTAAAACTCCTCCTTCAAGACCAACTCATTGA 1737 0.407 MSGGGDAKRNKRLAIIGVSTFLLVAMVVAVTVNVGFNNKKEPGEETSKESHVSQSVKAVKTLCAPTDYKKECEDSLIAHAGNITEPKELIKIAFNITIAKISEGLKKTHLLQEAEKDERTKQALDTCKQVMQLSIDEFQRSLERFSNFDLNSLDRVLTSLKVWLSGAITYQETCLDAFENTTTDAGKKMKEVLQTSMHMSSNGLSIINQLSKTFEEMKQPAGRRLLKESLPEWVDDRAGVRKLLNKMTGRKLQAHVVVAKDGSGNFTTITEALKHVPKKNLKPFVIYIKEGVYKEYVEVTKTMTHVVFIGDGGRKTRITGNKNFIDGVGTFKTASVAITGDFFVGIGIGFENSAGPEKHQAVALRVQSDRSIFYKCRMDGYQDTLYAHTMRQFYRDCIISGTIDFVFGDSIAVLQNCTFVVRKPLENQQCIVTAQGRKEKNQPTGLIIQGGSIVADPKYYPVRLKNKAYLARPWKDFSRTIFLDTYIGDMITPEGYMPWQTPAGITGTDTCYYGEYNNRGPGSDVKQRVKWQGVKTITSEGAASFVPIRFFHGDDWIRVTRVPYSPGATKTPPSRPTH* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3635 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Mtr7g3635 578 CDD PMEI-like_3 61 212 - -
Mtr7g3635 578 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Mtr7g3635 578 SMART PMEI_2 54 206 IPR006501 GO:0004857
Mtr7g3635 578 Gene3D - 249 568 IPR012334 -
Mtr7g3635 578 PANTHER PECTINESTERASE 13 569 - -
Mtr7g3635 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 211 IPR035513 -
Mtr7g3635 578 SUPERFAMILY Pectin lyase-like 253 567 IPR011050 -
Mtr7g3635 578 Pfam Pectinesterase 255 554 IPR000070 GO:0030599|GO:0042545
Mtr7g3635 578 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Mtr7g3635 578 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Mtr7g3635 578 PANTHER PECTINESTERASE 13 569 - -
Mtr7g3635 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3635 Mtr-Chr7 53347260 53349407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3635 1 574 Carbohydrate Esterase AT3G05610 50.171 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3635 K01051 - gmx:100801686 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3635 7 53347260 53349407 Mtr1g2985 1 41010742 41012800 PCT