Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3620 ATGGATCAAGAAGGAGGAGGATCCAACGGTGGCAGTAGATCTTCTTGCTATTACTCTGTTCTTGGTATTCGTAGTGATGCCTCCTCCTCTGATATTCGCACCGCTTACCGCAAACTCGCTATGAGATGGCACCCTGATAAATTCGCTCGGAATCCTACAACTGCCGGAGAAGCCAAACGACGGTTTCAGCAAATTCAAGAAGCATACTCAGTTCTATCGGATGAGTCTAAAAGATCAATGTATGATGCTGGACTATACGATCCTCTAGAAGAAGAAGACCAAGAATTTTGTGATTTTATGAGCGAAATGATCTCAATGATGAATAATGTCAAAGATGAGGGGGACAGTTTGGAGGATCTACAAAGGATGTTTGTTGAGATGGTAGGTGGGGATGGTATGAACTTTGATATGAACCAAAATCAGACGGCTGGGAAGAGAGGACGCTCAAGTGGATCAAGAGGCAACGCAGCCAAGCGCAGCAATCATTGCCGCTAG 495 0.4505 MDQEGGGSNGGSRSSCYYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPTTAGEAKRRFQQIQEAYSVLSDESKRSMYDAGLYDPLEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMNFDMNQNQTAGKRGRSSGSRGNAAKRSNHCR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3620 164 MobiDBLite consensus disorder prediction 136 164 - -
Mtr7g3620 164 Gene3D DnaJ domain 7 106 IPR036869 -
Mtr7g3620 164 ProSiteProfiles dnaJ domain profile. 16 85 IPR001623 -
Mtr7g3620 164 MobiDBLite consensus disorder prediction 136 157 - -
Mtr7g3620 164 SUPERFAMILY Chaperone J-domain 15 88 IPR036869 -
Mtr7g3620 164 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Mtr7g3620 164 PANTHER PUTATIVE, EXPRESSED-RELATED 12 152 - -
Mtr7g3620 164 PRINTS DnaJ domain signature 18 36 IPR001623 -
Mtr7g3620 164 PRINTS DnaJ domain signature 36 51 IPR001623 -
Mtr7g3620 164 PRINTS DnaJ domain signature 57 77 IPR001623 -
Mtr7g3620 164 SMART dnaj_3 15 77 IPR001623 -
Mtr7g3620 164 CDD DnaJ 16 74 IPR001623 -
Mtr7g3620 164 Pfam DnaJ domain 17 82 IPR001623 -
Mtr7g3620 164 PANTHER PUTATIVE, EXPRESSED-RELATED 12 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3620 Mtr-Chr7 53193641 53196354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3620 7 83 C2H2 Transcription Factor Family AT1G74250 41.026 1.26e-14 68.6