Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3618 ATGGGAATCATGGATCAAATGGATAAGGAATGTTGTTCATACGATGAAATGGGTGTGATCAAGAAATTTTGTGCTGATTGCAAAACCACTAAAACCCCACTTTGGAGAGGAGGACCAAATGGACCCAAGACGTTGTGCAACGCTTGTGGAATAAGGTATAGAAAGAGAAGAGGTTGTTGTAGCAAAGGACAAGAAAGGGAAAGGAAGAGAGAGAAAGCAGAAGCAACTAGCAGTGATAATGATGATTTGAGTGAGTGTTTGAAAATGAAGTTAGTGGCATTGGGTGAAGAGTTTTTGTTGCAGAAAAAACAAAGAATGATTAAATTAGGTGAAGAGGAACAAGCTGCTGTTTGTTTGATGGCACTCTCTTGTGGCTTTGTTTTTGCTTGA 390 0.3949 MGIMDQMDKECCSYDEMGVIKKFCADCKTTKTPLWRGGPNGPKTLCNACGIRYRKRRGCCSKGQERERKREKAEATSSDNDDLSECLKMKLVALGEEFLLQKKQRMIKLGEEEQAAVCLMALSCGFVFA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3618 129 SMART GATA_3 18 69 IPR000679 GO:0006355|GO:0043565
Mtr7g3618 129 Gene3D - 20 82 IPR013088 GO:0006355|GO:0008270
Mtr7g3618 129 PANTHER GATA TRANSCRIPTION FACTOR 16 5 129 - -
Mtr7g3618 129 Pfam GATA zinc finger 24 57 IPR000679 GO:0006355|GO:0043565
Mtr7g3618 129 PANTHER OS01G0976800 PROTEIN 5 129 - -
Mtr7g3618 129 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 58 - -
Mtr7g3618 129 ProSitePatterns GATA-type zinc finger domain. 24 49 IPR000679 GO:0006355|GO:0043565
Mtr7g3618 129 MobiDBLite consensus disorder prediction 62 81 - -
Mtr7g3618 129 CDD ZnF_GATA 23 72 IPR000679 GO:0006355|GO:0043565
Mtr7g3618 129 ProSiteProfiles GATA-type zinc finger domain profile. 24 54 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3618 Mtr-Chr7 53175844 53177223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3618 21 129 C2C2-Gata Transcription Factor Family AT5G49300 53.211 3.41e-31 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr7g3618 GATA 7.5e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3618 - - lang:109330084 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4427 4 58272133 58273196 Mtr7g3618 7 53175844 53177223 ECH
Mtr7g3618 7 53175844 53177223 Mtr7g3618 7 53175844 53177223 ECH