Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3615 ATGTCTCTGCGACCTGATACTTGGCCATCCTGGTCATCTCAAAGGAAGAAAGAGCATAAGAGTACTATCAAAATTGAGGCGGAATCCGGTGGTTGGAGAAGGAAAGAGGACGGCGTTTTCTTAATACGGAAGAATAAACGCCCTGATTCTATCTCGAAGAGGAGAAAGTTTTTTCGAGAAGAAACTTTTTCTCCAATGCTCAATGAGGATCCTCCTTTCCCCGTCTATATTTCAGATGCAGAATATGATGGTGTAATGGCCAAGGTGAAAACCATTCCTGCAATGACACTGGCCTTATTGTCTAACGACCCTGCTGCACAACTTGAAGCAACTACTCAGTTTGGAAAGCTACTATCAGGGGGCTACATCCCTCTAATTGATAAGGTGAAGCGAGCTGGTGTTGTCCTGCGGTTTGTGCAGTTTTTGACAAGGGATGATATGCCCCAATTGCAGTCCATGGCAGCATGGACTCTGATCAATGTCACTGCGGGATTGTCTGAGCATACAAATACTGTGATTGAACATGGTGCTGTTCCTCTGCTTGTGAAGCTTCTGAGCTCTGGCAGTGATGACGGCAAAGAACAGGCATTATGGGCATTAGGTAATATTGCTGGCAATTCCCTGACCGCAAGGGATATTGTTTTAAATCATGGTGCACTTTCTCCACTATTGTCTTTGATGTGGAATCCTTCTTCAACAAAAAAATCTACATGGAATATTGCTACATGGGCTTTTTTCAACTTCACTCGCGGAAAGCCTCTTCTAACTCTTCAGAATCAGATGCTACCAGCATTGTCTGGCCTTCAGGAGCTCTTATTGATGCCTGATGAAGAAGTTATACTATATGCATGCCATCTCCTCTCCTGGTTTACTCAGAAAGGTTCAGACAAAATGGTTCAAGCTATCGTTGAGGCAAAATTTTGCCCACGACTTGTAGAGTTACTACTGTATCCGGAGTCAAAAGTTGTTGTGCCGGCTCTGGAGATTCTAGGAGATATTGCTTCTGGTGATGATGCTCAGACTCAGTTTCTAATTAACAGTGGAGCTCTCCGTTGTCTTAAAGCTCTTCTTACACAAAGTGATAAAATCATCCTTGAAGAAGCGTGTTCGGTAATTGCAAATATCGCAGGTGGGAATAATGCTCAAAAACAGGATGTCATTGACGCCGATCTTATTAGTTCTCTTGTCCGTCTCACAAAGGCTGACTTCGACATCAGGAAGGAGGCTGTGTGGGTTATTTCTAACGTCACTCACGGAACTCTTGAGCATATTCGGTACTTGGCGTGTAATGGTTGCGTCGAGGCACTCTGTGATCAATTGACCAGCACAGACGCGACTATGCTGACACTTTGTCTGACTGGGCTGAAAAACATTTTAAAGGCAGGAGAAATTAACAAGGATAAGGGATTATATAAGGGGGTCAATGTTTATGCTCAAATGATTGAAGAGTGTGCAGGATTGGATAAGATTGCAAGATTGCAAAGCTATGACAACAATAACATTTACAAAAAGGCTGTGGAGATTTTGGAGAAATATTTTCCTGAGGACCTTGAAGTTGTTGGTGAATAG 1569 0.4315 MSLRPDTWPSWSSQRKKEHKSTIKIEAESGGWRRKEDGVFLIRKNKRPDSISKRRKFFREETFSPMLNEDPPFPVYISDAEYDGVMAKVKTIPAMTLALLSNDPAAQLEATTQFGKLLSGGYIPLIDKVKRAGVVLRFVQFLTRDDMPQLQSMAAWTLINVTAGLSEHTNTVIEHGAVPLLVKLLSSGSDDGKEQALWALGNIAGNSLTARDIVLNHGALSPLLSLMWNPSSTKKSTWNIATWAFFNFTRGKPLLTLQNQMLPALSGLQELLLMPDEEVILYACHLLSWFTQKGSDKMVQAIVEAKFCPRLVELLLYPESKVVVPALEILGDIASGDDAQTQFLINSGALRCLKALLTQSDKIILEEACSVIANIAGGNNAQKQDVIDADLISSLVRLTKADFDIRKEAVWVISNVTHGTLEHIRYLACNGCVEALCDQLTSTDATMLTLCLTGLKNILKAGEINKDKGLYKGVNVYAQMIEECAGLDKIARLQSYDNNNIYKKAVEILEKYFPEDLEVVGE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3615 522 SUPERFAMILY ARM repeat 13 516 IPR016024 -
Mtr7g3615 522 PIRSF Importin_alpha 8 520 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mtr7g3615 522 Pfam Armadillo/beta-catenin-like repeat 337 376 IPR000225 GO:0005515
Mtr7g3615 522 Pfam Armadillo/beta-catenin-like repeat 166 204 IPR000225 GO:0005515
Mtr7g3615 522 Pfam Armadillo/beta-catenin-like repeat 379 417 IPR000225 GO:0005515
Mtr7g3615 522 PANTHER IMPORTIN SUBUNIT ALPHA-4 11 516 - -
Mtr7g3615 522 MobiDBLite consensus disorder prediction 1 27 - -
Mtr7g3615 522 PANTHER IMPORTIN ALPHA 11 516 - -
Mtr7g3615 522 MobiDBLite consensus disorder prediction 11 27 - -
Mtr7g3615 522 SMART arm_5 420 460 IPR000225 GO:0005515
Mtr7g3615 522 SMART arm_5 122 163 IPR000225 GO:0005515
Mtr7g3615 522 SMART arm_5 295 335 IPR000225 GO:0005515
Mtr7g3615 522 SMART arm_5 337 377 IPR000225 GO:0005515
Mtr7g3615 522 SMART arm_5 379 418 IPR000225 GO:0005515
Mtr7g3615 522 SMART arm_5 206 250 IPR000225 GO:0005515
Mtr7g3615 522 SMART arm_5 165 205 IPR000225 GO:0005515
Mtr7g3615 522 Pfam Atypical Arm repeat 475 516 IPR032413 -
Mtr7g3615 522 Gene3D - 90 513 IPR011989 -
Mtr7g3615 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 176 218 IPR000225 GO:0005515
Mtr7g3615 522 Pfam Importin beta binding domain 15 112 IPR002652 GO:0006606|GO:0061608
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3615 Mtr-Chr7 53154077 53158582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3615 K15042 - cit:102577954 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3000 1 41164358 41169627 Mtr7g3615 7 53154077 53158582 ECH
Mtr4g4429 4 58312412 58316540 Mtr7g3615 7 53154077 53158582 ECH
Mtr2g1243 2 13472371 13476567 Mtr7g3615 7 53154077 53158582 ECH
Mtr7g3615 7 53154077 53158582 Mtr7g3615 7 53154077 53158582 ECH
Mtr7g3615 7 53154077 53158582 Mtr1g3000 1 41164358 41169627 PCT