Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3608 ATGTCTAACACCACAAGCAACAGTGCCGCTGGGGTTGACAACACATTCAGAAGAAAATTCGATCGTGAAGAGTATCTTGAACGTGCTCGTGAGCGTGAGAGACAGGAAGAAGAGAAAGCTAAACCTAAAGGTAGAGGTCCTCCAGTGCAGAGGAAACCATTGAAACATAGAGATTATGAAGTAGACCTTGAATCCCGCTTGGGAAAAACTCAGGTTGTAACGCCGGTTGCACCACTAAGCCAACAGGCTGGATATTACTGCTCAGTTTGTGAGTGCGTGGTGAAGGACTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAGAGAGCGTTGGGCATGTCTATGCGAGCTGAACGTTCTTCTCTCAAACAGGTTCAGGAACGGTTTGAAAATCTGAAGAAACGGAAAGACCTAGGAAGCTTTACAGAGCAAGATTTTGATGAAAGGATATTAAAACAGCAACAAGAGGAGGAAGAAAGAAAGCGACTGCGTCGGGAAAAGAAAAAAGAAAAGAAGAAGGAAGCAGTAGAAGAACCTGAAATGGATCCTGACGTTGCTGCCTTGATGGGGTTTGGAGGTTTTCGGTCGTCCAACAAAAAGTGA 609 0.4433 MSNTTSNSAAGVDNTFRRKFDREEYLERARERERQEEEKAKPKGRGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRAERSSLKQVQERFENLKKRKDLGSFTEQDFDERILKQQQEEEERKRLRREKKKEKKKEAVEEPEMDPDVAALMGFGGFRSSNKK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3608 202 Coils Coil 153 180 - -
Mtr7g3608 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 8 201 IPR040107 GO:0000398|GO:0005681
Mtr7g3608 202 Gene3D Classic Zinc Finger 79 118 - -
Mtr7g3608 202 MobiDBLite consensus disorder prediction 1 58 - -
Mtr7g3608 202 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Mtr7g3608 202 Pfam Zinc-finger of C2H2 type 85 109 - -
Mtr7g3608 202 MobiDBLite consensus disorder prediction 146 182 - -
Mtr7g3608 202 MobiDBLite consensus disorder prediction 15 58 - -
Mtr7g3608 202 MobiDBLite consensus disorder prediction 146 202 - -
Mtr7g3608 202 Coils Coil 117 137 - -
Mtr7g3608 202 SUPERFAMILY beta-beta-alpha zinc fingers 80 124 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3608 5 147 C2H2 Transcription Factor Family AT3G05760 79.021 1.17e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g3608 zf-C2H2_jaz 1.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3608 K12848 - gmx:100795833 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3608 7 53095802 53100121 Mtr7g3608 7 53095802 53100121 ECH