Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3600 ATGGCATCGAAGAGGACATCTCATACTAGTGATAGTTGTGATGACAATGTTACTTCAACCAGTACTAAGCGAATAAAACAACATCATATTCATGGGAATCTAGAAGAAGAACAACAAAAGGAGATCCAACACCTTTTATTTCCCACTATCAGTGCCTCTGCATTAGCCTTACGCTTGGAACCCTTACTTCGAAAACTGATACAAGAGGCGATTCACCTCCACCTAAACCCAAGTTGTGGATTGACGCTTATGTCCAACACATTTGGAAGGAGACGTTTGCAATTCTGTTTCATGAACAAATTGCCAAACAGAATTTTCACTAAGTCCACCATCAAAGCTGAGGGAGATGAACCACTTCAAATTGAACTGCGTGATGTTGAAAATCAGCAACGCGTAGTCATGGAAGAGGGTTCCTCCATGAAGATCCAATTATGTGTCCTATATGGTGACTTTGAAAAAGAGGATTGGACAGCTGAGGAATTTAATACTCAAATTGCACCTCCAAGAGAGGGAAAAGAAGAACTGTTGAAAGGAAACGAATTCATTACACTAAGAAATGGAGTTGCTGATATCGACAAAGAGATTGAGTTTACAGATATATCAAAGGGAAGAAACGGTCAATTTCGGCTAGGGGTTAAAATAGTTCAATCTAATTCAATTGGAGTGTGCATTCGAGAAGGTAGAAGCGAACCTTTTAAGGTCCTGGATGTTCGAGGAAAGAATTACGAGAAACACGATCGTCCATCGTTGAATGATGAGGTATGGCGTCTGAAAGGGATACGTAAAAATGGTCCACTTGACAAGCTGTTGGCATCAGATGGAATACACACTGTTAAGGATTTTTTGAGATTGTACATAACCAATGAAGCTTCATTAAGAGAGAAAATAGGCAAGATTGCAAGGAATTCATGGAATACAATTGTTGCACATGCTAAAGATTGTGATGTAGACAATGATGATGAGCGCTACATCTATTACTCAACTGAACAACCAATATCGTTCCTTGTCTTTAATGCAATTTATAAGGTTGTGGAGGTGACTTTTCATAATGAACAAAACGCTCGTTCTATTCAATCTCTAAACCAGCAAGAAAAGCGGTTGGTGGAAAGAGTTAAGCAACATGCTTACAAATATTTCAATGATTGGAATCCATTGCCAATTGATACAACAACACTTGGATTGGAGGAGACATTGACAGGTGTACAAAATGCACAATATGACGGTCAAGATCAAGCCCTGCAACAGTCTGACTTTCTAGTTTGTCAGCAAGGTCAAAAAGAAATTGGGCAAAGTTATGTTCAACCATGTATCTCTACTTCATATGTTAATGAGGGAATGGATAATTACCAGATCTATGTTGATCCAATGCCAGACATAAGAGAAATACCACAAAACAATCACGTGGAAGGTGAAATGTACATTGATGGGGATGGTTATGGATCACATTTTCCAGTTGTAGAAGGTCGCTATTCGATGGAGAATCTCATGAATGACTATCCTATTTATACAACATGTGAGCCAGAAAATTACAACTTATATGGTTTCTCTGATGTAGCTGAGTGTAGCACCCATGTTAATTTCCTCGATTCTTCTATGGATATATCAAGCAGTGATAAATCAAAAGCAGTGTGGTGTAAGGTTGGGATTGCTATCAAATGGGTCATATCAATAAGAAGGGTTGCAGCTGCTGCCAAGAGGAATGCAAACTTGTTTTATTTTAACTAA 1725 0.3861 MASKRTSHTSDSCDDNVTSTSTKRIKQHHIHGNLEEEQQKEIQHLLFPTISASALALRLEPLLRKLIQEAIHLHLNPSCGLTLMSNTFGRRRLQFCFMNKLPNRIFTKSTIKAEGDEPLQIELRDVENQQRVVMEEGSSMKIQLCVLYGDFEKEDWTAEEFNTQIAPPREGKEELLKGNEFITLRNGVADIDKEIEFTDISKGRNGQFRLGVKIVQSNSIGVCIREGRSEPFKVLDVRGKNYEKHDRPSLNDEVWRLKGIRKNGPLDKLLASDGIHTVKDFLRLYITNEASLREKIGKIARNSWNTIVAHAKDCDVDNDDERYIYYSTEQPISFLVFNAIYKVVEVTFHNEQNARSIQSLNQQEKRLVERVKQHAYKYFNDWNPLPIDTTTLGLEETLTGVQNAQYDGQDQALQQSDFLVCQQGQKEIGQSYVQPCISTSYVNEGMDNYQIYVDPMPDIREIPQNNHVEGEMYIDGDGYGSHFPVVEGRYSMENLMNDYPIYTTCEPENYNLYGFSDVAECSTHVNFLDSSMDISSSDKSKAVWCKVGIAIKWVISIRRVAAAAKRNANLFYFN* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3600 574 Pfam Calmodulin binding protein C-terminal domain 322 381 IPR046829 -
Mtr7g3600 574 PANTHER OS02G0177800 PROTEIN 1 569 IPR012416 GO:0005516
Mtr7g3600 574 MobiDBLite consensus disorder prediction 1 20 - -
Mtr7g3600 574 Pfam Calmodulin binding protein central domain 249 314 IPR046830 -
Mtr7g3600 574 MobiDBLite consensus disorder prediction 1 28 - -
Mtr7g3600 574 Pfam Calmodulin binding protein-like N-terminal domain 93 236 IPR046831 -
Mtr7g3600 574 PANTHER CALMODULIN-BINDING PROTEIN 1 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3600 Mtr-Chr7 53043537 53047115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3600 51 380 Calmodulin-binding Proteins AT5G26920 38.348 6.87e-63 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3600 - - mtr:MTR_7g111980 1142.49