LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g3599	ATGGCATCGAAGAGGGCATCTCATGTGGGTAGTACTAGTAGTTATGACAAGGATCTTCATGTTCCTTCTACTAGTACTAAGAGAATAAAACATGGGAATACAGAAGAACAACAAAAAGAGATCCAACACCTTTTATTTCCCACTACTAGCGCCGCCCGTAACACCTTTGCGTTTTACTTTGAACCTTTACTTCGAAAAGTGATGCAAGAGGAGATTCAACATAAACTCCACCACTACCTAATCCCAAGCTGTGGATTGACCCTTAACGAGTTGGCCAACACATATGAGAGGAGGAGACGTTTGCAATTGTGTTTCATGAACAAAATGCCTGAAACAATTTTCACAATGTCCGAAATCAAAGCTGAGGGAGATGAACCGCTTCAAATTGAACTGCGTGATGCTGGAAATCAGCAACGCATAGTCAGGGAAGAAGGTTCCTCGATGAAGATCCAATTATGTGTCCTATATGGTGACTTTGAAAAAGAGGATTGGACAGCTGAGGAGTTTAATACTCAAATTGTACCTCCAAGAGTTGGAAAAGGACAACTACTGAAAGGAAATAAAATCATTACACTAAGAAATGGAGTTGCTGATATCAACATAGAGATTGAGTTTACAGATATATCAAAGAGAAGAACCGGTCAATTTCGGCTAGGGGTTAAAATAGTTCAATCTAATTCAATTGGAGCGTGCATTCGGGAAGGTAGAAGCGAACCTTTTAAGGTCCTGGATGTTCGAGGAAAGGCTTACGAGAAGCGCGATCGTCCATCATTGAATGATAAGGTATGGCGTCTGAGAGGAATACGTAGAGATGGAACACTTGACAAGCAGTTGGCCTTGGATGGAATACACACTATTAAGGATTTTTTGCAGCTGTTGATAACTAATGAAGATTCATTAAGAAATAAAATAGACAAGACTGGTGGGAAGTTATGGAAGAAAATTATTGCACATGCTAAACATTGTGATGTAGATGATGATGGGTGCTACATCTATTATGTAACAGAACAACCAATATCCTCCCTTGTCTTTAATTCAATTTTAAAGGTTGTGGAGGTGACTTTTCATAATCAACAAAACTCTCGTTCTATACAATCTCTCAATCCGCAGGAAAAGCGTTTGGTAGAAGAAGTTAAGCAACATGCTTACAAAAATTTGAATGATCTAAAACCATTGCCAATTGATACAACAATTCATGGTTTGGTGGAGACATCATCAAGTGTACAAACTGCACAATATGGTGGTCAAGATCAAGCCCGGCAACCGTTTGACTTTCCAATTGCTCAGCAAGGCCTGTTGAGTGCTTATTCTACAAGCTTTGACCTGCCATTTCCGTGCCAACCAGAAATGTGGCCGACTACCTCAATCTCACAAAGTGGCCTTGTTGGTTCTGAATTTTGTGATCAAATGGCAGCCTTGGGAGAAATGTCGTCGCCATACTTTTCTGGAGAAGAGGTATCACGGGTTGGTCTATTTGGAAGTTACACGTTGGAACAAGTAAATGCAAATCCTCTGTCCTTTGTTTATGATGATGGAGCAGGATCGAGCAATCATTATTCTTCCACCAATTTTGTTGTGCAAACATCAAGCAAATTGAAACTGAAAAAATATTGGCAAAAGATTCGATCTACTCTCAAATGGTTCATGTTGTATGTAGCTAGAAAGAGGGCAAAACTGTTTTATGATCTGTATTAA	1695	0.3965	MASKRASHVGSTSSYDKDLHVPSTSTKRIKHGNTEEQQKEIQHLLFPTTSAARNTFAFYFEPLLRKVMQEEIQHKLHHYLIPSCGLTLNELANTYERRRRLQLCFMNKMPETIFTMSEIKAEGDEPLQIELRDAGNQQRIVREEGSSMKIQLCVLYGDFEKEDWTAEEFNTQIVPPRVGKGQLLKGNKIITLRNGVADINIEIEFTDISKRRTGQFRLGVKIVQSNSIGACIREGRSEPFKVLDVRGKAYEKRDRPSLNDKVWRLRGIRRDGTLDKQLALDGIHTIKDFLQLLITNEDSLRNKIDKTGGKLWKKIIAHAKHCDVDDDGCYIYYVTEQPISSLVFNSILKVVEVTFHNQQNSRSIQSLNPQEKRLVEEVKQHAYKNLNDLKPLPIDTTIHGLVETSSSVQTAQYGGQDQARQPFDFPIAQQGLLSAYSTSFDLPFPCQPEMWPTTSISQSGLVGSEFCDQMAALGEMSSPYFSGEEVSRVGLFGSYTLEQVNANPLSFVYDDGAGSSNHYSSTNFVVQTSSKLKLKKYWQKIRSTLKWFMLYVARKRAKLFYDLY*	565

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g3599	564	Pfam	Calmodulin binding protein central domain	257	322	IPR046830	-
	Mtr7g3599	564	MobiDBLite	consensus disorder prediction	1	20	-	-
	Mtr7g3599	564	PANTHER	OS02G0177800 PROTEIN	33	554	IPR012416	GO:0005516
	Mtr7g3599	564	MobiDBLite	consensus disorder prediction	1	37	-	-
	Mtr7g3599	564	Pfam	Calmodulin binding protein-like N-terminal domain	101	244	IPR046831	-
	Mtr7g3599	564	PANTHER	CALMODULIN-BINDING PROTEIN 60 G	33	554	-	-
	Mtr7g3599	564	Pfam	Calmodulin binding protein C-terminal domain	329	390	IPR046829	-
	Mtr7g3599	564	MobiDBLite	consensus disorder prediction	21	37	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g3599	Mtr-Chr7	53031436	53034726	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g3599	52	389	Calmodulin-binding Proteins	AT5G26920	37.647	5.16e-65	216

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g3599	-		-	mtr:MTR_7g111980	593.964