Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3578 ATGGGCGGAGGTGGAGCAACAACTAACGCGGAGGCGCAGTATACGACGGCGAAGATATCGGTATGGTGGGATATAGAGAACTGTCATGTTCCTAAAGGCTCCGATCCACATGCAATTGCGCAGAATATCAGTTCAGCACTTGTTCGTATGAACTATTGTGGTCCCGTTTCCATCTCCGCCTATGGTGACACCACTCGTATACCTGCTTCTGTACAGCACGCGCTTTCTAGCACCGGAATTTCGCTTAATCATGTTCCCGCCGGTGTGAAAGATGCAAGTGATAAGAAGATCCTTGTCGACATGCTGTTCTGGGCAGTGGACAACCCTGCACCTGCGAATTATTTATTGATTTCGGGTGATCGAGATTTCTCTAATGCCCTCCATCAACTGCGAATGAGGAGGTATAATATTCTTCTCGCACAACCTCAAAAAGCATCTGCACCACTAGTTGCAGCAGCTAAGAGTGTATGGCTCTGGACTACTCTCTTAGCTGGAGGACCTCCACTAACCAGTGGTGATACACAACAACTCAGTAATAGTAGCTTCTTACCGTCTTCTGAAACTCTACAAGTTCCTGTCTCAAATGCTGCTCAGACACAGCAACAGGGGGGTCCCTATTCTGAAATTCATGCTGGAAATTCAAATGTTCAAAACGGAGGAAGGGGATTTGATTCTAGATATCAGGGTAGACCAACTTGGAGAAACCCGAGTCAACCAAATGGACCGAAAGCAATGAATCCACCCCCAGTTGGACTTCAAGATAACCGTAATAATGTAAACAATTATCGACCTGGCAACTATAATCCAAATGTTTCTCAAAGTGGATCAACCGCAAACTTTGAGCGCGCCAATTCTGATCCATTATGGAGCAATAATGGTAATCAACAAGGAAATCATCAAAATCAACAGGGAAATCATCAAAATCAACAGGGGAATCATCAAAATCCATATTCCCAGCCATTAAGACCAAACGGTTTTCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATTCTCCAAATTCCCATACTTTTGCAACTACACCGGTGCCACCTAGGACTGTTGGAAACAATTTCAGTACAGGATCACCTAGAACTGTGCCAGATATTGGCAATCTGAACATATCTGGTTATCCCAATAATGGTCATAACCCCCGCACTGTTCCGCAACGGAGTGGAGATTTGAAACCGAATCCTAAGAGTAGTGCTCCACTTCCGGTAAGATCAACGAATGAACAAAATGGACATATGGTGCATAGCAGTACCACACAAGGCTATCCACATGGTCCAGAATATCAACCTACACACTCGACAGCAATGGGTAATAATAAACTTCCCTCTAATGGTAAGTGGGGATCTTCAGGTTGTCCTAAACCTTCTGAATATGTACAAGGCCTTATAGGTGTTGTTTTACTTGCCCTGAACTCACTAAAAAATGCCAAGATGATGCCAACTGAGAAGAATATAACTGATAGCATCCGTTATGGAGATCCCAAGCATCGCAACACTGATGTTAAGAAAGCTCTGGAGAGTGCTATGGAGCAGCAGATGGTGGTAAAACAAAATTTAGGTGCTTTAACGCTGTATGTTGGTAAGAATGACAAACTCTGGAAGTGTGTAAATCCCTTAGGTGGAAATCCTAAACAGCACTCCAAAGAAATTTGGGACGAAATTCAAAATTTTCTAACAACCCCTGCTGGTAGATCGGCAATAATGGATACACAGTGCAAGTATGAAGCAGGTATTGTGATAAAGAGCATGTGTTTTAAAGATCTTGCTTTGGGCGATGTCCTTCAGATATTGAACATGGTGATAACCCATAAAAAATGGATAGTTCATCAGCAGTCTGGCTGGCAACCACTCATCCTTACTCTTCCCGAGTCAAACCCCGATTCAGGGGTCACCTCTGACGCATAG 1917 0.4377 MGGGGATTNAEAQYTTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGPPLTSGDTQQLSNSSFLPSSETLQVPVSNAAQTQQQGGPYSEIHAGNSNVQNGGRGFDSRYQGRPTWRNPSQPNGPKAMNPPPVGLQDNRNNVNNYRPGNYNPNVSQSGSTANFERANSDPLWSNNGNQQGNHQNQQGNHQNQQGNHQNPYSQPLRPNGFPLQPPFAPSNSYSPNSHTFATTPVPPRTVGNNFSTGSPRTVPDIGNLNISGYPNNGHNPRTVPQRSGDLKPNPKSSAPLPVRSTNEQNGHMVHSSTTQGYPHGPEYQPTHSTAMGNNKLPSNGKWGSSGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEKNITDSIRYGDPKHRNTDVKKALESAMEQQMVVKQNLGALTLYVGKNDKLWKCVNPLGGNPKQHSKEIWDEIQNFLTTPAGRSAIMDTQCKYEAGIVIKSMCFKDLALGDVLQILNMVITHKKWIVHQQSGWQPLILTLPESNPDSGVTSDA* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3578 638 CDD PIN_limkain_b1_N_like 18 142 - -
Mtr7g3578 638 MobiDBLite consensus disorder prediction 403 426 - -
Mtr7g3578 638 Gene3D - 9 161 - -
Mtr7g3578 638 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 3 623 - -
Mtr7g3578 638 MobiDBLite consensus disorder prediction 335 388 - -
Mtr7g3578 638 PANTHER LIMKAIN B LKAP 3 623 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mtr7g3578 638 MobiDBLite consensus disorder prediction 196 222 - -
Mtr7g3578 638 MobiDBLite consensus disorder prediction 251 322 - -
Mtr7g3578 638 MobiDBLite consensus disorder prediction 196 426 - -
Mtr7g3578 638 Pfam NYN domain 18 154 IPR021139 GO:0004540
Mtr7g3578 638 Pfam OST-HTH Associated domain 575 621 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3578 Mtr-Chr7 52813031 52817426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3578 8 207 C2H2 Transcription Factor Family AT5G61190 69.307 4.63e-86 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3578 - - gmx:100794608 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3578 7 52813031 52817426 Mtr7g3578 7 52813031 52817426 ECH