Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3574 ATGGATTACCGATGGACCAAAGGTAGCAGCAGCAGTAGTAAGCATGATTCTTCTGGTTCCCGGAGAAACCAATTCAAAAAGGATCAGGCATACGATGATGATGATTTTCGCTTGCCCAGAAATCAAAGGCCAACTGAAAACGTTGATCTGGATAATGTTGAACAAGCTTCTCTTGACACACACATAACTTCTTCTAATATTGGTTTTAAACTTCTTCAAAAAATGGGTTGGAAAGGAAAGGGTCTTGGCAAAAATGAACAAGGAATAGTTGAACCAATAAAATCTGGGATTAGAGATCCAAGACTAGGAGTCGGCAAGCAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATGTCCAGCGAAAAAAACTCGATATTGAGTTGGAGGAGACAGAGGAGAATGTGAGGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACCGAGGTGAAAGAAATTCGGAAGGTGTTCTTTTGTGAGCTCTGCAACAAGCAATACAAATTGGCAATGGAGTTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGGAAGCGTTTCAAAGAAATGAAGGAAATGCATGGCAGCAGTAGCCGGGATGATAGGCAAAAGCGAGAACAGCAGCGTCAAGAAAGAGAATTGGCTAAGTTTGCCCAAATCGCTGATGCTCAAAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGCAGCAGTTTCAGTTTCCTCTGAATCTAAGACTGCTACTGCACTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTGCTAAAGGCACTGCTTCCAAGAGCACATTTGGTGTCAAGAAGCAAAATGTTCCGAAGAAGCAAAATCTCCCAGTGGCCTCTATATTTGGAAACGATAGCGATGAAGAGTGA 915 0.423 MDYRWTKGSSSSSKHDSSGSRRNQFKKDQAYDDDDFRLPRNQRPTENVDLDNVEQASLDTHITSSNIGFKLLQKMGWKGKGLGKNEQGIVEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENVRKREVLAEREQKIQTEVKEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQERELAKFAQIADAQKQQRLQLQQESGSAAVSVSSESKTATALTDQEQRNTLKFGFSAKGTASKSTFGVKKQNVPKKQNLPVASIFGNDSDEE* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3574 304 MobiDBLite consensus disorder prediction 192 215 - -
Mtr7g3574 304 MobiDBLite consensus disorder prediction 1 52 - -
Mtr7g3574 304 MobiDBLite consensus disorder prediction 19 44 - -
Mtr7g3574 304 MobiDBLite consensus disorder prediction 272 304 - -
Mtr7g3574 304 SMART G-patch_5 62 107 IPR000467 GO:0003676
Mtr7g3574 304 Pfam G-patch domain 65 105 IPR000467 GO:0003676
Mtr7g3574 304 Coils Coil 114 141 - -
Mtr7g3574 304 ProSiteProfiles G-patch domain profile. 64 109 IPR000467 GO:0003676
Mtr7g3574 304 MobiDBLite consensus disorder prediction 1 18 - -
Mtr7g3574 304 MobiDBLite consensus disorder prediction 272 296 - -
Mtr7g3574 304 ProSitePatterns Zinc finger C2H2 type domain signature. 161 183 IPR013087 -
Mtr7g3574 304 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 304 - -
Mtr7g3574 304 MobiDBLite consensus disorder prediction 234 259 - -
Mtr7g3574 304 Pfam Zinc-finger double-stranded RNA-binding 159 186 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3574 Mtr-Chr7 52783749 52787515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3574 9 304 C2H2 Transcription Factor Family AT5G26610 62.866 1.22e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3574 - - mtr:MTR_7g111520 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3574 7 52783749 52787515 Mtr7g3574 7 52783749 52787515 ECH