Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3572 ATGGGCACAGCTACATGCATCGATATCATTGTTGCCATCATCCTCCCTCCTCTCGGTGTCTTCCTCAAGTTTGGCTGCCATGTGGAGTTCTGGCTCTGTTTGGTGCTAACCCTTTTTGGCTATCTCCCTGGAATTCTCTATGCTATCTATGCTATTACCAAGTGA 165 0.4727 MGTATCIDIIVAIILPPLGVFLKFGCHVEFWLCLVLTLFGYLPGILYAIYAITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3572 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Mtr7g3572 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Mtr7g3572 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Mtr7g3572 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3572 Mtr-Chr7 52761573 52763590 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3572 1 54 RCI2 Gene Family AT3G05890 81.481 3.30e-27 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3572 - - aof:109836707 107.842