Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3568 ATGATGCCCCTGCATGAGTTATACCACATGTCTAAAGAAAAAGTTGATCATAAAGAGATGAACAATTCTTGTGCCCCAGATCAATCTTCTGTACCCAGAAACGATTTGTTTGAGCTGGTTTGGCAAAATGACCAGATTTTAGTGCATGGTCAATCTAGTAATTCCAATAGAGCTAAAATGACTCCAACTTTACCATCTCATACTCTTAAGGGGCATGATAAATATTCAGGACAACATGCTAATGAAACAAATACAAGGATAGGAAAGTTTGAGGATTTAGATAATGGTTTGAATGAAATTATTACAAGGTCTGTTTCTTCAAGTCAAGATGAAGATTTGATGACGATGATGCCTTGGTTGAATTGTGCAATGGATGATGAACACTCTTTACATTATAGTTCTTGTTTCGTACATGAACCTGGTGCCAGAACAAATGACTTTGCTGCCACAAATAAATTTTCTTTGCTTGATAGAAAAAGTAATTGTATTCAAGTATTTAGTGACTCTCATAAACAAGGGATCCTTTCCAAGGGTTCTTCACTTGCAGTTGAAGATTTTGATACCTCTGAACTAAAAACTAGCACCAATCAGTTAAATATGTCATCGTTGTTGCAACAATGTCAACCCTCATTCGAATCAATTAGATTTAGAGAATCAGGTTTAAGTGAGAATAATACAAAAGGTAATGCAAACCAGCATGCACCTTGTGAAGAAATCTCTCATGTTCCATCTTCCTCAACCGTAATGAATTTCACCCATTTTGCAAAACCTGCGGCTATTGTGAAAGCTAATCTTCAAAACATTGGTTTCTCTTCATCAAGATCAGAACGTGTGGGAGCAAAGAACAAAGATGCAGCTGCAATAGGAAGGAATCCTTGCGAATCATCAAAAGTTGATTTAAGTGTAGAATGTCCAAAGAGTTCAGCCATACATTGTCATCAGTCAGTGGAGCCATCCAGGGTTGGTTTGAAACCTTTGGAGCCGAAATCTCTTGAGAAAAACACTACTGTTTCTACTTCTGCTTGCAAAGAAGATGTATCCAAAGTTGATCAAACTTCCAATCAAGTTCTTAGTGAGAGTAGCAGAAAAGGTCAAGAAGTTTTTAAAAAATGTACGGAGCTAACAGTAGCCTCTTCCTCTGTTTGCTCTGACAATGGCGTGCATAGAAGTTCAGATGATGCTAATCAAAATTTGAAGCGAAAAAATCTGGACTCTGAGGATTCTGAGTGGCACAGTGAAGATTTTGAGGATGAATCAATCGGTGTTAAAAGAACTGATCATGGACGAGGTGTTACGGGCTCGAAGAAAAATCGTTCAACCGAAGTGCACAATCTATCTGAAAGGAGACGAAGAGACAGGATCAATGAGAGGATGCGTGCATTGCAAGAACTCATACCGAATTGCAACAAGGCGGATAAAGCTTCAATGCTGGATGAGGCAATTGAGTATCTTAAATCACTTCAACTCCAACTGCAAATCATGTCAATGGGAGGTGGTGGTTTATACATGCCTATGACGTTACCAGCAGGAATGCAGCACATGCATGCGGCTCACATGTTTCCCTTTTCACCCATGAGTGTTGCCATGCAAATGGGATTGGGGGTGCCTCAATTTCAAGGAACTCACCTTCCTGTTGCACATACATCTGGACTTGCTGCTTTACATGGGATGGTAAGACCAAATCCTCAAATGTTTGGGCTTCAAGCTGGTCAGGGACTGCACATGCCAATGCCAAGTGCTTCAATGTTTTCTTATCCCGGAGAGCCTGTTATGAACTCATCAGCTGTAGAATTAAATGCTAGTGGAACAGCAGGACTAATGGAAACCGTGGAATCGGCTTCAGCCTCTAAGTTAAAGGATCAAATGCCTAAGTTAAAGGATCCAATGCCAAATGTGAACTCACAAGTTATGCTAAACAACAAGGGATGTAGCTCAACAAATCAAATGTCGATCCAGTGTGAAGCAACAACCGGTGGGCTTGAACAATCAAATGTGGTACTCGATAGCGCCCATGCTTTGCTGGAAAATGACAAAAGAGACAACATTGAGATTGAGATTGATAAATCTCATGAGTTATGA 2079 0.3992 MMPLHELYHMSKEKVDHKEMNNSCAPDQSSVPRNDLFELVWQNDQILVHGQSSNSNRAKMTPTLPSHTLKGHDKYSGQHANETNTRIGKFEDLDNGLNEIITRSVSSSQDEDLMTMMPWLNCAMDDEHSLHYSSCFVHEPGARTNDFAATNKFSLLDRKSNCIQVFSDSHKQGILSKGSSLAVEDFDTSELKTSTNQLNMSSLLQQCQPSFESIRFRESGLSENNTKGNANQHAPCEEISHVPSSSTVMNFTHFAKPAAIVKANLQNIGFSSSRSERVGAKNKDAAAIGRNPCESSKVDLSVECPKSSAIHCHQSVEPSRVGLKPLEPKSLEKNTTVSTSACKEDVSKVDQTSNQVLSESSRKGQEVFKKCTELTVASSSVCSDNGVHRSSDDANQNLKRKNLDSEDSEWHSEDFEDESIGVKRTDHGRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQIMSMGGGGLYMPMTLPAGMQHMHAAHMFPFSPMSVAMQMGLGVPQFQGTHLPVAHTSGLAALHGMVRPNPQMFGLQAGQGLHMPMPSASMFSYPGEPVMNSSAVELNASGTAGLMETVESASASKLKDQMPKLKDPMPNVNSQVMLNNKGCSSTNQMSIQCEATTGGLEQSNVVLDSAHALLENDKRDNIEIEIDKSHEL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3568 692 PANTHER TRANSCRIPTION FACTOR PIF3 2 650 IPR044273 GO:0003700|GO:0006355
Mtr7g3568 692 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 435 505 IPR036638 GO:0046983
Mtr7g3568 692 Gene3D - 433 495 IPR036638 GO:0046983
Mtr7g3568 692 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 438 487 IPR011598 GO:0046983
Mtr7g3568 692 MobiDBLite consensus disorder prediction 382 448 - -
Mtr7g3568 692 MobiDBLite consensus disorder prediction 393 408 - -
Mtr7g3568 692 CDD bHLH_AtPIF_like 438 499 - -
Mtr7g3568 692 MobiDBLite consensus disorder prediction 415 448 - -
Mtr7g3568 692 SMART finulus 444 493 IPR011598 GO:0046983
Mtr7g3568 692 PANTHER TRANSCRIPTION FACTOR PIF3 2 650 - -
Mtr7g3568 692 Pfam Helix-loop-helix DNA-binding domain 442 488 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3568 Mtr-Chr7 52707218 52712075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3568 2 581 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 31.419 3.04e-46 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g3568 HLH 6.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3568 K12126 - gmx:100794974 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3568 7 52707218 52712075 Mtr7g3568 7 52707218 52712075 ECH