Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3566 ATGGCTAAACTTTTCTGGCTTTTCATTGCAATAGGACTTGTTATCATCAACTTGGTTTATGGTCAACAACATCACTTCTTCAATGAAACTGAAGAACTCTTTCTGTTAGAGGCTCATGAACATGCAGCATCCTTTCTTGAGGAGGGTAATGGAAATCCTCTTCTCGTAGGACTCACCCTTGTTCACAATGCAGCTGCTAAAGGAGCAGTGTGCTTGGATGGAACATTACCTGGTTACCATTTGCACCGTGGATATGGATCAGGAGCAGACAGTTGGCTTGTTAATTTAGAGGGAGGTGGATGGTGTAACAATGTCAGATCATGTGTTTATCGCAAGAAAACACGGCGTGGATCATCATTATACATGGAAAAGGAGATACCATTCACAGGAATACTTAGTAATAAACCTGAAGAAAATCCAGATTTTTTCAACTGGAATAGAGCAAAGCTTCGTTATTGTGATGGTGGCTCATTTGCTGGTGATGGTGAAGATCAGGATGCAGAACTGCAATTTAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATATCAAAGGGAATGCATTTTGCTAATCAAGCTCTTCTTTCCGGATGTTCCGCTGGTGGCCTAGCAACTATTATACACTGCGATGAATTTCGAGGTCTCTTTCCAAGGACTACTAAAGTGAAGTGTCTAAGCGATGCAGGGTTGTTTCTTGATTCGATTGATATATCTGGTGAGCGCACCCTCCGGAATATGTACAATGGTGTTGTAGGGATGCAGGAAGCACAGAAGAATCTACCGCAGATTTGTACTAATCACCTTGATCCTACATCGTGTTTCTTCCCTCAGAATTTGATTGCCAGTGTTAGAACACCACTTTTTCTTCTCAATACTGCTTATGATTCATGGCAGATCCAGTCAAGTTTAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATGAATGCAGATTAAACCATGCTAAATGCACAAGGCCACAAATCAAATTTCTGCAAGGGTTCAGGACTCACATGTTGAATTCTATTAAAGACTTCTCAAGATCAAACAAGAATGGATTGTTTATCAATTCATGTTTCGCTCACTGCCAAACTGAGAGGCAAGATACATGGTTTTCAGACAATTCGCCGGTTATTAGGAACAAGGTAATTGCTTTAGCTGTTGGAGACTGGTATTTTGATCGAGAAGGTGTTAAGGTCATTGATTGTCCTTACCCTTGTGATAATACATGTCACCATTTGGTTTTCAGTTGA 1260 0.4135 MAKLFWLFIAIGLVIINLVYGQQHHFFNETEELFLLEAHEHAASFLEEGNGNPLLVGLTLVHNAAAKGAVCLDGTLPGYHLHRGYGSGADSWLVNLEGGGWCNNVRSCVYRKKTRRGSSLYMEKEIPFTGILSNKPEENPDFFNWNRAKLRYCDGGSFAGDGEDQDAELQFRGQRIWAAAMEDLISKGMHFANQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDSIDISGERTLRNMYNGVVGMQEAQKNLPQICTNHLDPTSCFFPQNLIASVRTPLFLLNTAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTRPQIKFLQGFRTHMLNSIKDFSRSNKNGLFINSCFAHCQTERQDTWFSDNSPVIRNKVIALAVGDWYFDREGVKVIDCPYPCDNTCHHLVFS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3566 419 PANTHER PECTIN ACETYLESTERASE 4 418 - -
Mtr7g3566 419 Pfam Pectinacetylesterase 54 398 IPR004963 GO:0016787
Mtr7g3566 419 PANTHER NOTUM-RELATED 4 418 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3566 Mtr-Chr7 52681855 52685120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3566 55 418 Carbohydrate Esterase AT1G57590 71.978 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3566 K19882 - gmx:100788448 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3058 1 41844211 41848277 Mtr7g3566 7 52681855 52685120 ECH
Mtr1g3085 1 42131177 42134870 Mtr7g3566 7 52681855 52685120 ECH
Mtr4g4542 4 59464601 59469497 Mtr7g3566 7 52681855 52685120 ECH
Mtr7g3566 7 52681855 52685120 Mtr7g3566 7 52681855 52685120 ECH
Mtr7g3566 7 52681855 52685120 Mtr1g3058 1 41844211 41848277 PCT