Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3548 ATGAGAAGAATGAATATTATTCTGATAATAATAACAGTAACTTTTTCCTCAGTTAGATCTCAGACACAAAATCTATCTCCTCGGTATATCTTGGAGAACGATAACGATGTCGTTTCAGTTTCATCCTCTCCCCTGCTGCCTCAACCTCTCATGATCCCACTCACTCTTATTCATGGAGCTGTTTCTAAAGGAGCAGTATGTTTGGATGGAACTTTACCTGGTTACCACTTCCATCCCGGATCTGGATCTGGTGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGACGCGGTTCCTCAAAATACATGGAAAAGCAACTACCATTCACTGGAATATTGAGCAATAAAGCTGAACAAAATCCTGATTTCTTTAACTGGAACAGAGTCAAAGTGCGGTACTGTGATGGGGCTTCTTTCAGTGGAGACAGTCAAAACGAGGCTGCACAGCTTCAATTTAGAGGACAGAAAATATGGCTAGCTGCAATGGAAGAATTAATGTCCAGGGGAATGAAGAACGCCAACCAGGCTCTTTTATCTGGATGCTCTGCGGGTGGTCTGGCATCTATACTACATTGCGATGAGTTCCAAAGCTTGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTTCTTGATGCAACTGATGTATCTGGGGGGCACACATTGAGGAATCTGTTTGGAGGTGTAGTTAATTTACAGGAAGTGCAAAAAAATCTACCAAAAAGTTGTCTCAACCACCTGGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGATCGATCATGTTCAGACTCCATTGTTTCTGCTGAATGCAGCTTATGATGCATGGCAGTTCCAAGAAAGTCTAGCTCCTCATTCAGCAGATCCTCATGGATCTTGGAATAATTGTAAATCAAATCATGCAAATTGTAATTCATCCCAAATTCAGATCCTCCAAAACTTCAGAAATCAAATGCTAAATGACATCAAAGGATTTTCAACGACTTCTCAATCTGGATTATTCATAAATTCTTGTTTTGCTCATTGCCAATCGGAGAGACAAGATACATGGTTTGCTGATGACTCTCCCCTCCTTAACAACATGCCAATTGCGGTTGCCATTGGAAATTGGTTTTTCGATCGTCAAGTTGTCAAAGCTATTGATTGTGCTTACCCCTGTGATAATACCTGCCATAATCTGGTCTTCAAGGATTGCAACCTGTCCTATCCGGTGGATACTTGA 1278 0.4092 MRRMNIILIIITVTFSSVRSQTQNLSPRYILENDNDVVSVSSSPLLPQPLMIPLTLIHGAVSKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKYMEKQLPFTGILSNKAEQNPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSRGMKNANQALLSGCSAGGLASILHCDEFQSLFPKSTKVKCLSDAGFFLDATDVSGGHTLRNLFGGVVNLQEVQKNLPKSCLNHLDPTSCFFPQNLIDHVQTPLFLLNAAYDAWQFQESLAPHSADPHGSWNNCKSNHANCNSSQIQILQNFRNQMLNDIKGFSTTSQSGLFINSCFAHCQSERQDTWFADDSPLLNNMPIAVAIGNWFFDRQVVKAIDCAYPCDNTCHNLVFKDCNLSYPVDT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3548 425 Pfam Pectinacetylesterase 48 395 IPR004963 GO:0016787
Mtr7g3548 425 PANTHER PECTIN ACETYLESTERASE 2 419 - -
Mtr7g3548 425 PANTHER NOTUM-RELATED 2 419 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3548 Mtr-Chr7 52487422 52493011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3548 30 415 Carbohydrate Esterase AT2G46930 68.380 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3548 K19882 - gmx:100785270 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3548 7 52487422 52493011 Mtr1g3085 1 42131177 42134870 PCT