Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3535 ATGGCAATGTCTGTGACTAGAACAAAACGAGACTTAGTTAAACCTGCCAAGGAGACCCCATTCGTCACACTTGACATGTCAGTAATCGACAATTTACCTGTTCTAAAATGCAATGTTAGAACCTTGCATGTGTTTAGACATGGTCCTAAAGCAGCAAGGGTCATAAGAGAAGCATTGTCCTTAGCACTCGTTCCCTACTACCCCCTTGCAGGACGACTCAAAGAGTCTAATCCGCAGTGTCTCCAAATCAAATGCTCGGGTGATGGTGTTTGGTACGTTGAGGCATCAACTAATTGCACACTTGACTCTGTCAATTTCTTTGATGACATGGAGTCTATTCCATATGGTAGTCTTTTTCCAGATAATGTTCACGAGATCGAATACATCGACCCCCTTGTGCAAATGCAGGTGACTCAATTTGGATGTGGAGGTTTTGTGATAGGCCTGGTATTCAGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCGGTCGGGGAGCTAGCTAGAGGACTTGACAAACCCACCATCGAACCAGTGTGGCACAGGAACTTTTTTCCCTCTCAAGCACCTGCATTGCCAAAACTACCTCTTACACCTCAATTGCCATGCTACAAGCTAGAGCATTCCAACATAGACATACCCGCGGAACAAATAAACCGGCTGAAGAGGGAGTTTCAACAAGTTACTGGACAAAGTTGTTCTACCTTCGAAATTGTTGCTGCATTGTTTTGGAGCAGCAGAACAAGAGCCATTAATTTTGATCCCAATACCCAAGTGAAGCTCGTGTTCTTTGCAAATTGTTGATACCTCGTAGACCCTCCTCTACCCAATGGTTTCTATGGAAATTGTTTCTTCCCAGTGACAACTACAGCCTCATGTAAGTCACTTAGAATAGCACCAAATATCATTAAAGTGGTGAAGCTTATCCAAGAAGCGAAGACCAAGTTACCTTCAGAGTTCGTTAAGTACTTGAAGGGTGAACATATAAAAGGTGATGATGAGTTTGAGGACCCGTTTGCACCAACACCGAATTACGCCACACTGTTTATGTCTGAGTAGGGGGGGTTGGGATTCGACAATGTGGACTATCAGTGGGGTCCACCTGTTCATGTAGTCCCCATTCAAGGCTCTGTCATTGTGCCAGCTGGCATTGTGTGCTCGCTGCCTCTCCCAAACAGAGGGATTTGTTTGGTTACATGGTGTGTGGAGGAGGCACATCGCCTTCCCTTCATTGATCAAATTCATGGTCTTATATATATAAGCAACTGTTATAATAAGAACTTCACCGTGCCAGATTCTAAAAGTTCGTCTTTTTTACACATAAGAACAATATTTTATTATAATTCAAAGATAACAAGTTGTGTCCGTCAGGAAACTAAAATGCAGTTTCTGTTGTATTTATTGTTATATTTTCTTTTCAAATAA 1437 0.4259 MAMSVTRTKRDLVKPAKETPFVTLDMSVIDNLPVLKCNVRTLHVFRHGPKAARVIREALSLALVPYYPLAGRLKESNPQCLQIKCSGDGVWYVEASTNCTLDSVNFFDDMESIPYGSLFPDNVHEIEYIDPLVQMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGELARGLDKPTIEPVWHRNFFPSQAPALPKLPLTPQLPCYKLEHSNIDIPAEQINRLKREFQQVTGQSCSTFEIVAALFWSSRTRAINFDPNTQVKLVFFANC*YLVDPPLPNGFYGNCFFPVTTTASCKSLRIAPNIIKVVKLIQEAKTKLPSEFVKYLKGEHIKGDDEFEDPFAPTPNYATLFMSE*GGLGFDNVDYQWGPPVHVVPIQGSVIVPAGIVCSLPLPNRGICLVTWCVEEAHRLPFIDQIHGLIYISNCYNKNFTVPDSKSSSFLHIRTIFYYNSKITSCVRQETKMQFLLYLLLYFLFK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3535 476 Gene3D - 1 200 IPR023213 -
Mtr7g3535 476 Gene3D - 201 412 IPR023213 -
Mtr7g3535 476 Pfam Transferase family 3 376 - -
Mtr7g3535 476 PANTHER ACYL TRANSFERASE 4 1 417 - -
Mtr7g3535 476 PANTHER ACYL TRANSFERASE 4 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3535 Mtr-Chr7 52347949 52350201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3535 3 408 Monolignol Biosynthesis Gene Families AT5G48930 27.376 7.23e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3535 - - gmx:100783128 595.504