Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3534 ATGGAAAAAACCGAACCCTTTCTTCTGATCAACCGTCAAAATTTACAACCCTTCATTTCTTCCAAATCCTTCAACGACATAGCCACCCTACAACAACAACAACAACAACCACCACCACAATCATCTGAGATACAATCCATCAACTTCACTCCACAACAACAATCATTTTCTCATCACAAACAAAAAAAACTCAGCCGCTGCAAAACAGCACCAGCTATGTTCATTCTCCCACACCTTAAACCCATCAATGACCAACCTCAACTTCCCAAACCTCAAACCAATTCCATCATTCGACAAGGCATTTGGCTTCTCCTTATATACCTCTCTGTCGGTGTCATAATATACTCTTTCAACACAAAAAATTTCTCTGGCATTGAAACTCACCCTGTTGTTGATGCTCTTTATTTTTGTATAGTCACCATGTGTACAATTGGTTATGGAGACATAGCTCCTTTAACACCAATGACTAAACTCTTTGCTTGTGTTTTTGTTTTAGTGGGTTTTGGATTCATAGATATACTCTTAAGTGGACTTGTTAATTTTGTTTTGGATTTGCAAGAGAATACGATTTTAACCGGGCTTCAAATGGGTGCTAGAGAAGGGTTTACTGCTAGGGATTATATAGTTGATGTTGCAAAAGGTAGGATGAGAATTAGGTTGAAGGTTGGTTTAGCACTTGGTGTTGTGGTTTTATGTATTGGTGTTGGGAGTTTGGTTTTGTGTTTTGTTGAGGGTTTGGATTGGGTTGATTCTATTTATTTGGCTGTTATGTCTGTTACAACGGTTGGTTATGGTGATAGAGCTTTTAAGACACTTCCGGGACGATTGTTTGCGGCGATTTGGTTGTTGTTTTCTACTTTGATGGTTGCAAGGGCTTTTCTTTATTTAGCTGAAGCTAGAATTGATAGAAGACATAGGAGATTGGCTAAGAAGGTTTTGCATAGAGAAATTACTATTGAAGATTGGCTTGCTGCTGATATCAACAATACTGGTTTTATTAGTAAGTCAGAATATGTGATTTTCAAGCTGAAAGAGATGGGTAAAATACAAGACAAAGATGTAATGCAAATTTGTGATCAGTTCAGGAAGCTTGACCCCTCTAACTGTGGGAAGATAACATTACCTCATCTCTTGGAGGGTAGGTCGTGA 1149 0.3829 MEKTEPFLLINRQNLQPFISSKSFNDIATLQQQQQQPPPQSSEIQSINFTPQQQSFSHHKQKKLSRCKTAPAMFILPHLKPINDQPQLPKPQTNSIIRQGIWLLLIYLSVGVIIYSFNTKNFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPMTKLFACVFVLVGFGFIDILLSGLVNFVLDLQENTILTGLQMGAREGFTARDYIVDVAKGRMRIRLKVGLALGVVVLCIGVGSLVLCFVEGLDWVDSIYLAVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFISKSEYVIFKLKEMGKIQDKDVMQICDQFRKLDPSNCGKITLPHLLEGRS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3534 382 Pfam Ion channel 229 298 IPR013099 -
Mtr7g3534 382 Pfam Ion channel 103 182 IPR013099 -
Mtr7g3534 382 SUPERFAMILY EF-hand 322 377 IPR011992 -
Mtr7g3534 382 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Mtr7g3534 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 45 377 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr7g3534 382 SUPERFAMILY Voltage-gated potassium channels 212 320 - -
Mtr7g3534 382 Gene3D - 206 325 - -
Mtr7g3534 382 Gene3D - 86 194 - -
Mtr7g3534 382 SUPERFAMILY Voltage-gated potassium channels 95 182 - -
Mtr7g3534 382 PRINTS Two pore domain K+ channel signature 139 167 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr7g3534 382 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mtr7g3534 382 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 45 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3534 Mtr-Chr7 52341780 52344307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3534 60 378 Ion Channels AT4G01840 67.692 2.38e-154 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3534 K05389 - gmx:100801488 556.984