Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3532 ATGAAAACTAAAACATTGCTAGTCTCGTCCTTTTTCCTCATCTTGATTATTAATATTACTTTTGGTATTGTCCACAGTGATAATTTCAATGAGTTTAGAATCCCTAATAAGGTTGTCAAGTCCTTATGCAAAGACACTGATGACCATAAACTTTGCCATGATGTCCTCTACCCCGTGAAAACCTCAAACCCAATAGATTATATTGATGTTGTGGTGAAGAACTTGATGGAAAGCGTAGAAAACGCATTTAATGACATGAGTAATAAACTTAGTTCTATGGAGAATAATGAAAGCAACAATTTAGGTATCAAGATGGCCCTTGAGGACTGCAAGGACATGTTACAGTTCGCTATCAATGAACTTAAGGCATCTAAAGTTATCATCACTGAAAGTAGTAGCATTCGCAGTATACACAATCGTTCGGTAGAACTCAAGAATTTATTTGGGGCTGTCATTGCCTACCAACAATCTTGCCTTGATGGCTTTTCTGATACAAAAAGTGATAATAATAAGGCCATGTTACATTTGCAAACAGATAACTACTTGGACAATGTTGGAAAGCTCACTGGTTTGGCACTTGATGTTGTATCCGAGATCTCTCATTCAACGAATGTTAAATCATTAGTGGATAATGAAGGGTATCCAACTTGGTTTTCCGTTGATGATCGTAAGCTGATGGCTATGGGTCCGATTGGAGCCACTGACAACGACGTTTTAGTAACGGTTGCCAAGGATGGCAGTGGTCAATATAAGACTATTGTTGATGCTATTAATGCATACCCAAATAACCATCAAGGAAGGTACATTATCTACACTAAGAGTGGTGTATATGATGAGTACATTTTTGTTGACAAGGATAAACCAAATGTTTTCATGTTTGGTGATGGCCCTACAAAAACCATTATCACCGGCAGCAAAAGCTTTCTCCAGGGTATCAAGACAATGAGAACCGCCACTTTTTCAACCGTTGCAGAAGGCTTCGTTGCAAGGGGAATTGCTTTTGAGAACACCGCTGGTCCTCGAGGTCACCAGGCAGTGGCAGTTCGCGTGCAAGGTGATCGTTCAGCTTTCTACGACTGTATATTTCGTGGTTACCAAGACACATTGTATGTGCATGCACATCGTCAATATTATCGTAACTGTGAAATCTCTGGCACAGTAGACTTCATATTTGGTTACTCGTCAACTCTAATACAAGATTCGAAGATAATTTTAAGAATGCCTTATCCACATCAAAATAACACGATAGTAGCTGATGGAACAGAACAAAAGAACATGCCAACAGGAATTGTTGTTCAAAACTGTGTCATTTTGGCAGAGGCTGAATTGTTACGAAACAAGTTGAAAGTAAAGTCTTACTTGGCAAGACCATGGAAGGAATATTCAAGAGCTGTGTTTATTGAGAATGTGATAGGTGATGTTATTCAGCCAGAAGGGTATATTCCATGGACAGGAGAATATCCAAATATTGAGAACTCTTACATGGCTGAGTTTGGGAACAGTGGAGAAGGTGCTGGTGTTGAAAGAAGAGTGGATTGGGCTAAGGGACTCATTAGCAAGGAAGAAGCTTTTCAATTTACTGCTGCTCAATTTATTCAGGCTAACACATGGTTGCCTATAACTGGCATTCCTTTTTATAATGGCTTCATAAGAGAGATTAATTAA 1665 0.3898 MKTKTLLVSSFFLILIINITFGIVHSDNFNEFRIPNKVVKSLCKDTDDHKLCHDVLYPVKTSNPIDYIDVVVKNLMESVENAFNDMSNKLSSMENNESNNLGIKMALEDCKDMLQFAINELKASKVIITESSSIRSIHNRSVELKNLFGAVIAYQQSCLDGFSDTKSDNNKAMLHLQTDNYLDNVGKLTGLALDVVSEISHSTNVKSLVDNEGYPTWFSVDDRKLMAMGPIGATDNDVLVTVAKDGSGQYKTIVDAINAYPNNHQGRYIIYTKSGVYDEYIFVDKDKPNVFMFGDGPTKTIITGSKSFLQGIKTMRTATFSTVAEGFVARGIAFENTAGPRGHQAVAVRVQGDRSAFYDCIFRGYQDTLYVHAHRQYYRNCEISGTVDFIFGYSSTLIQDSKIILRMPYPHQNNTIVADGTEQKNMPTGIVVQNCVILAEAELLRNKLKVKSYLARPWKEYSRAVFIENVIGDVIQPEGYIPWTGEYPNIENSYMAEFGNSGEGAGVERRVDWAKGLISKEEAFQFTAAQFIQANTWLPITGIPFYNGFIREIN* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3532 554 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
Mtr7g3532 554 PANTHER PECTINESTERASE 8 549 - -
Mtr7g3532 554 Coils Coil 76 96 - -
Mtr7g3532 554 PANTHER PECTINESTERASE 8 549 - -
Mtr7g3532 554 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Mtr7g3532 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 197 IPR035513 -
Mtr7g3532 554 CDD PMEI-like_3 41 200 - -
Mtr7g3532 554 Gene3D - 238 551 IPR012334 -
Mtr7g3532 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 184 IPR006501 GO:0004857
Mtr7g3532 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 200 IPR035513 -
Mtr7g3532 554 Pfam Pectinesterase 240 535 IPR000070 GO:0030599|GO:0042545
Mtr7g3532 554 SUPERFAMILY Pectin lyase-like 239 547 IPR011050 -
Mtr7g3532 554 SMART PMEI_2 34 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3532 Mtr-Chr7 52324186 52326151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3532 6 550 Carbohydrate Esterase AT3G05610 34.813 7.10e-119 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3532 K01051 - gmx:100808559 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3532 7 52324186 52326151 Mtr1g3107 1 42372490 42373725 PCT
Mtr1g3106 1 42371715 42372541 Mtr7g3532 7 52324186 52326151 PCT