Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3529 ATGCAACGAAAAAATTGGAGAGCAAATATTATGCCTAATGCTGTTGTTGCCAAGGATGGTAGCGGCCAATTTAAAACCATCCAGGCTGCTCTTGCCTCTTACCCTAAGGGAAACAAAGGCAGATATGTTATCTACGTTAAGGCCGGTGTCTATGACGAATACATCACTGTCCCCAAGGATGCTGTTAACATTCTTATGTATGGTGATGGCCCTGCAAGGACCATTGTCACTGGTAGAAAGAGCTTTGCTGCTGGTGTCAAGACCATGCAAACCGCCACCTTCGCCAACACCGCAATGGGGTTCATTGGAAAGGCAATGACATTTGAGAACACAGCCGGTCCTGATGGTCACCAAGCTGTGGCATTTAGAAACCAAGGAGATATGTCTGCTTTGGTGGGTTGCCATATCGTGGGTTACCAAGACAGCTTGTATGTTCAAAGCAACAGACAGTACTACCGCAATTGTCTTGTCTCGGGTACCGTTGACTTCATCTTTGGATCATCTGCTACCTTGATCCAACACTCTACAATCATTGTAAGAAAGCCTGGCAAAGGGCAATTCAACACAATTACTGCAGACGGATCAGACACGATGAATTTGAATACTGGTATTGTGATCCAGGATTGCAATATCATCCCAGAAGCAGCATTGTTCCCAGAAAGATTCACAATTCGGTCTTACTTGGGCAGACCATGGAAGTATTTAGCAAAGACTGTCGTCATGGAATCCACCATTGGTGATTTCATTCATCCAGATGGATGGACCATTTGGCAAGGAGAACAAAATCACAACACATGTTACTATGCAGAGTATGCAAACACCGGACCTGGTGCCAATGTTGCGAGGAGGGTCAAGTGGAAGGGTTATCACGGTGTCATTAGCAGGGCCGAGGCTAACAAATTCACAGCTGGTATATGGCTCCAAGCTGGACCCAAGTCTGCAGCTGAATGGTTGAATGGTCTTCATGTTCCTCACTACCTTGGCTTCAAAGCTTGA 996 0.4588 MQRKNWRANIMPNAVVAKDGSGQFKTIQAALASYPKGNKGRYVIYVKAGVYDEYITVPKDAVNILMYGDGPARTIVTGRKSFAAGVKTMQTATFANTAMGFIGKAMTFENTAGPDGHQAVAFRNQGDMSALVGCHIVGYQDSLYVQSNRQYYRNCLVSGTVDFIFGSSATLIQHSTIIVRKPGKGQFNTITADGSDTMNLNTGIVIQDCNIIPEAALFPERFTIRSYLGRPWKYLAKTVVMESTIGDFIHPDGWTIWQGEQNHNTCYYAEYANTGPGANVARRVKWKGYHGVISRAEANKFTAGIWLQAGPKSAAEWLNGLHVPHYLGFKA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3529 331 ProSitePatterns Pectinesterase signature 2. 157 166 IPR033131 -
Mtr7g3529 331 Gene3D - 7 328 IPR012334 -
Mtr7g3529 331 PANTHER PECTINESTERASE 7 329 - -
Mtr7g3529 331 Pfam Pectinesterase 13 308 IPR000070 GO:0030599|GO:0042545
Mtr7g3529 331 ProSitePatterns Pectinesterase signature 1. 38 57 IPR018040 -
Mtr7g3529 331 SUPERFAMILY Pectin lyase-like 13 307 IPR011050 -
Mtr7g3529 331 PANTHER PECTINESTERASE 7 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3529 Mtr-Chr7 52297113 52298371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3529 10 329 Carbohydrate Esterase AT2G47030 50.155 2.06e-110 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3529 K01051 - gmx:100815015 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3529 7 52297113 52298371 Mtr1g3108 1 42376317 42380339 PCT
Mtr1g3107 1 42372490 42373725 Mtr7g3529 7 52297113 52298371 PCT