Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3525 ATGGAAGCTTTTCAATTGTACGGTAATGGTGGTGGTTCATCTGATTTAAGGGCTATGGGGAAAAATTCAAAAGAGTGGGATTTGAATAATTGGAAATGGGATAGTCATCTTTTCATAGCTACTAGTAAGTTGACTCCGGTGCCGGAACACCGCCAATTTTTGCCTATTCCGGTTGGTGGTGGTGGTGGTGGTGGTGGTTCTAACTCAAATAGTTCATCATCTTGTTCAGAACAGTTAGATCTTGGGATTTGTCAAGTGAAGGAAGGTGAGAGGAAAAGGAGGGTTATTGTTGTCGAAGATGAACTAGGTTTAGGTTTGAATAAGGAAGGTGGTAATCTTAGTTTAAACCTTGGTGGTGGTGTTGCTACATGGGAAGGAAATAATGGGAAGAAAAGTAGAGTAGCTGGTGGAGGTAGTTCTAGTAGAGCATTTTGTCAGGTGGAGGATTGTCGCGCAGATCTTAACAACGCGAAAGATTATCACCGACGTCATAAAGTTTGTGAGATACATTCAAAGGCTAGTAAAGCCCTTGTCGGAAATGCGATGCAGCGGTTCTGCCAACAATGTAGTAGGTTTCACTTGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGTCGAAGACGTTTGGCAGGCCATAATAAAAGGAGGAGAAAAACAAATCAAGATGCTGTTCCTAATGGAAGTTCACCGAACGATGATCAGACTAGTAGTTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCAGCCTGACAGGTCAAATCAGACTGCCGACCAGGATCTGCTTACTCATCTTTTAAGGAGTCTTGCTAATCAGAATGGCGAACAAGGGGGGAGGAACTTGTCTAACCTTTTACGGGAACCTGAGAATCTGTTAAAAGAAGGGTCTTTATCGGGGAAGTCTGAGATGGTTTCTACTTTAGTTACCAATGGTTCTCAAGGTTCTCCAACTGTTACAGTACAGAATCAAACAGTTTCTATTAGTGAAATTCAGCATCAAGTGATGCATTCACATGATGCTAGGGTTGCTGATCAACAAACCACATTTTCTGCAAAGCCCGGTGTTTCAAATAGCCCTCCAGCTTACTCAGAAGCAAGAGATAGTACTGCTGGACAGACCAAGATGAATGATTTTGATCTGAATGACATCTATATTGACTCAGACGATGGCATAGAGGACATAGAAAGGTTGCCTGTCACTACAAATCTTGGTGCTAGCTCTCTTGATTACCCGTGGATGCAACAGGATTCACATCAGTCGAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCCACTGGCGAAACTCAGAATCGCACGGATCGGATTGTTTTTAAACTCTTCGGTAAAGGACCGGGCGATTTTCCTCTTGTACTTAAAGCACAGATTCTTGATTGGTTATCCCACAGTCCAACTGATATTGAAGGATATATACGGCCTGGTTGTGTTGTTTTGACTATTTATCTGCGTCAGGCTGAGGTTGTGTGGGAGGAGCTTTGCTTTGATCTGACTTCCAGTTTGAATAGGCTCCTGGGTGTCTCAGATGATGATTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCCTTCATTTTCAATGGCCAGATTGTCATCGATACACCCCTTCCTTTCAGGAGTAATAATTATGGTAAGATTTTGAGTGTTAGTCCAATTGCTATACCATCATCAAAGACAGCTCAATTTTCTGTGAAGGGTATCAACCTGACTCGCCCTGCCACAAGGTTATTGTGTGCTTTAGAAGGGAATTATTTGGACTGTGAAGATACTGATGAGCCTATGGATCAATGCTCCAAGGATCTTGATGAGCTTCAGTGCATCCAATTTTCATGTTCTGTCCCTGCGATGAATGGACGAGGGTTTATTGAGATTGAGGACCAGGGTTTGAGCAGCAGTTTTTTTCCTTTCATAGTTGTGGAGGAGGATGTTTGCTCTGAAATCTGTGTGCTTGAGCCTTTACTGGAGTCAAGTGATACTTATCCAGATAATGAAGGGGCTGGAAAAATTCAAGCAAAAAATCAAGCCATGGATTTCATTCATGAAATGGGTTGGCTTCTCCACAGAAGGCAGATAAAATCTAGCGTTCGTTTGAATTCTAGTATGGATCTGTTTCCATTAGATCGATTCAAGTGGCTCATGGAGTTCTCTGTGGACCATGATTGGTGTGCAGTAGTTAAAAAGCTATTGAACCTCATGCTTGATGGAACAGTGAGTACAGGAGACCACACATCCCTGTATCTTGCACTTTCAGAGTTGGGTCTCCTTCACAGAGCTGTGAGGAGAAATAGCAGGCAGTTGGTGGAGCTTCTTTTGAGATTTGTTCCTCAAAATATTTCAGATAAACTAGGACCTGAAGACAAGGCGCTGGTTAATGGAGAGAATCAAAACTTCTTGTTTAGACCTGATGCTGTGGGTCCTGCTGGTTTGACACCGCTTCATATAGCAGCCGGGAAAGATGGTTCTGAGGATGTACTAGATGCTTTGACTAATGATCCTTGCATGGTGGGAATTGAAGCATGGAATAGTGCTCGCGACAGCACAGGGTCAACACCTGAGGATTATGCACGATTACGTGGTCATTATACTTACATTCATTTGGTGCAAAAGAAAATCAACAAGAGCCAAGGAGGGGCTCACGTGGTGGTTGATATTCCTAGCATTCCGACAAAGTTCGACACAAGCCAGAAGAAAGATGAATCGTGCACTACCTTTCAGATTGGAAATGCTGAAGTTAAAAAGGTTCGAAAGGACTGCAAACTTTGTGATCATAAGCTGTCGTGTAGAACTGCTGTACGAAAGTCTTTCGTATACAGACCTGCAATGCTGTCAATGGTGGCTATAGCAGCGGTCTGTGTCTGTGTGGCTCTTCTATTCAAAAGCTCGCCGGAAGTTCTGTATATATTCCGACCTTTCAGGTGGGAATCTTTGGATTATGGAACAAGCTGA 3006 0.4298 MEAFQLYGNGGGSSDLRAMGKNSKEWDLNNWKWDSHLFIATSKLTPVPEHRQFLPIPVGGGGGGGGSNSNSSSSCSEQLDLGICQVKEGERKRRVIVVEDELGLGLNKEGGNLSLNLGGGVATWEGNNGKKSRVAGGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNQDAVPNGSSPNDDQTSSYLLISLLKILSNMQPDRSNQTADQDLLTHLLRSLANQNGEQGGRNLSNLLREPENLLKEGSLSGKSEMVSTLVTNGSQGSPTVTVQNQTVSISEIQHQVMHSHDARVADQQTTFSAKPGVSNSPPAYSEARDSTAGQTKMNDFDLNDIYIDSDDGIEDIERLPVTTNLGASSLDYPWMQQDSHQSSPPQTSGNSDSASAQSPSSSTGETQNRTDRIVFKLFGKGPGDFPLVLKAQILDWLSHSPTDIEGYIRPGCVVLTIYLRQAEVVWEELCFDLTSSLNRLLGVSDDDFWRTGWVHIRVQHQMAFIFNGQIVIDTPLPFRSNNYGKILSVSPIAIPSSKTAQFSVKGINLTRPATRLLCALEGNYLDCEDTDEPMDQCSKDLDELQCIQFSCSVPAMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICVLEPLLESSDTYPDNEGAGKIQAKNQAMDFIHEMGWLLHRRQIKSSVRLNSSMDLFPLDRFKWLMEFSVDHDWCAVVKKLLNLMLDGTVSTGDHTSLYLALSELGLLHRAVRRNSRQLVELLLRFVPQNISDKLGPEDKALVNGENQNFLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWNSARDSTGSTPEDYARLRGHYTYIHLVQKKINKSQGGAHVVVDIPSIPTKFDTSQKKDESCTTFQIGNAEVKKVRKDCKLCDHKLSCRTAVRKSFVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYIFRPFRWESLDYGTS* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3525 1001 Gene3D - 733 925 IPR036770 -
Mtr7g3525 1001 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 15 1000 - -
Mtr7g3525 1001 MobiDBLite consensus disorder prediction 414 447 - -
Mtr7g3525 1001 SUPERFAMILY Ankyrin repeat 760 887 IPR036770 -
Mtr7g3525 1001 MobiDBLite consensus disorder prediction 350 376 - -
Mtr7g3525 1001 MobiDBLite consensus disorder prediction 209 234 - -
Mtr7g3525 1001 MobiDBLite consensus disorder prediction 55 74 - -
Mtr7g3525 1001 Pfam SBP domain 145 218 IPR004333 GO:0003677
Mtr7g3525 1001 ProSiteProfiles Zinc finger SBP-type profile. 142 219 IPR004333 GO:0003677
Mtr7g3525 1001 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 15 1000 IPR044817 GO:0003677
Mtr7g3525 1001 SUPERFAMILY SBT domain 143 223 IPR036893 GO:0003677|GO:0005634
Mtr7g3525 1001 Gene3D - 136 206 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3525 Mtr-Chr7 52225663 52236251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3525 20 1001 SBP-box Gene Family AT3G60030 53.722 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mtr7g3525 SBP 9.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3525 - - gmx:100809806 1489.17