Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3516 ATGGCAAACATAAACGTCGAAACGTTCCTATCATACCTTTCTCTGACTGCGCCATTGATTCCCAATCCCGTTACTGATGTTGATATGCTGGTTAATAAGCTTCGTCGAAAATATCGAACCTATGTCATTGAATTTGACGTGGAGCATGGTGCTGTTCATCTTCCAAACATGTTCATGCATGACTTTGGCGACCAGATCGATTTTATTGCGACATTGGTTGATAGTGGACATAATCAGTTTGAGGTTTACGTCGAGAAGCACACCAGTGGCATATACCTTACAAGGGGATGGTGTGCACTGCGTGATTTCTACAAAATCAAACTTGGTGCTTGGGTAACAATGGTATTTGTTGGAAATGGCAGGTTTGAGATAAGCTTGGAGGATAGGGTTGGGGACAAGATACAAAGTCCCATGTTTAATCCACCAATGAACTTCGTTATTGATCGTTCATGGCTGCCTTTCCAAATGATGGATGCTGTTCCAACTGCTTATGTGCATTCTGATATTAGCTTCCTATATTCATATGAGAAGAAGTTGTCTGCTACTGAGTTGGATTCTGGCTGGATGGTTCTTGCTTTTTTCGGGTTTTGCAAGCAGACTTTGTGCAAGGGTACTACTTCAATCAATTTGGTGGATGAGTGTGGGAACAAATGGATGTGCACGGTGGTCTACGGTACCAGGCCTTATAAACACTTTAAGATAGGTGGTGGATGGAAGCGGATGGTGGATGCACGCAGACTTCGTATAGGCTGCATTGTTAAGCTTGGTGCACCTGCTGATGGGAGCAACCAGAAATTATATTTTAAGGTTATTCGTCATTAG 822 0.4282 MANINVETFLSYLSLTAPLIPNPVTDVDMLVNKLRRKYRTYVIEFDVEHGAVHLPNMFMHDFGDQIDFIATLVDSGHNQFEVYVEKHTSGIYLTRGWCALRDFYKIKLGAWVTMVFVGNGRFEISLEDRVGDKIQSPMFNPPMNFVIDRSWLPFQMMDAVPTAYVHSDISFLYSYEKKLSATELDSGWMVLAFFGFCKQTLCKGTTSINLVDECGNKWMCTVVYGTRPYKHFKIGGGWKRMVDARRLRIGCIVKLGAPADGSNQKLYFKVIRH* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3516 273 Gene3D - 31 129 IPR015300 -
Mtr7g3516 273 SUPERFAMILY DNA-binding pseudobarrel domain 173 255 IPR015300 -
Mtr7g3516 273 SUPERFAMILY DNA-binding pseudobarrel domain 40 125 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3516 Mtr-Chr7 52140259 52141758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3516 36 133 REM Transcription Factor Family AT3G53310 30.612 4.35e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3516 - K18707 mtr:MTR_3g452180 386.726