Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3505 ATGGACGCGAAGGATATTCTTGGTTTGCACAAAAACTCATTTCCATCTTCTCTTGATAATAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTTTATGCACTTACTGGTGGAATGCCACCTCTTATGCCATCAATTGATGCTTCTCAATTGAAGAAAAAGCCTCCTACTCACGAAAAGGTTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTCATCTCTACCATTGGGTTCGAGTAGTCAATGGTGTTCTTCCTACTGGAGACTATTCTTTTGCCAAGTACAACAAGTCTGTTGACATTATCAAATACACAGACGAGGAATACGAAAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAAATGAATTATTTGATTTGTGTGAGAGGTTCGATCTTCGTTTTGTTGTGATAGCTGATAGGTTCCCATCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGTGTTGCGGGCTATATTACTTGCCAGAGCTGCATCTTCCGGGGACATTGCAACACATCCTATCATTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGGGCACTGTCTATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGGATAGCTGAATTACGGATGGCTTCTAAGGTTACTGAACAGTCTCAATTGGCTGTTGCTTCAAATGCTGATGCAGAACTTACAGAGAGGGCTGTCCCCGGTGAAACTGTATCTCCTTCGAATGTGCAACTTCCACAAATGGTCGTGCCTTCTGCAGATAATGCTTCTACTCTAGCTTCTCTTCGCATGCTTCGTGTATATTTGAGGACATATGCACTCGAGCAAATGGTGCAAGCTTCAAACGCAACTGCTGGAGTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTCGGGGTCAATTTGAAACCGAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCCGAAGGTTCATCTTTCCGTGATGGATCCTACGGTGAAACACCAGGCACACCAAAGGATCGTACATTTATTCCCGATTCGTTGAATTTTGGAGGCGAAAGGGTTGGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCCACCTACAGCAGCTCATAAAAGACCTAGAAAACAAAAGGCCTCAGATCTTTAA 1302 0.4286 MDAKDILGLHKNSFPSSLDNKKSRPPKESQRKPDGISREVYALTGGMPPLMPSIDASQLKKKPPTHEKVTWQWLPFTNSARKDDLHLYHWVRVVNGVLPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPMWTKEETNELFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVLRAILLARAASSGDIATHPIIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQSQLAVASNADAELTERAVPGETVSPSNVQLPQMVVPSADNASTLASLRMLRVYLRTYALEQMVQASNATAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGGERVGKKDQKRKGHGAPPTAAHKRPRKQKASDL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3505 433 MobiDBLite consensus disorder prediction 370 433 - -
Mtr7g3505 433 Gene3D - 100 187 - -
Mtr7g3505 433 MobiDBLite consensus disorder prediction 1 36 - -
Mtr7g3505 433 MobiDBLite consensus disorder prediction 401 415 - -
Mtr7g3505 433 MobiDBLite consensus disorder prediction 21 35 - -
Mtr7g3505 433 SMART sant 127 176 IPR001005 -
Mtr7g3505 433 CDD SANT_DMAP1_like 131 173 - -
Mtr7g3505 433 PANTHER BNAA04G26950D PROTEIN 2 433 - -
Mtr7g3505 433 Pfam SANT/Myb-like domain of DAMP1 103 177 IPR032563 -
Mtr7g3505 433 SUPERFAMILY Homeodomain-like 127 178 IPR009057 -
Mtr7g3505 433 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 433 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3505 Mtr-Chr7 52028994 52036167 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr7g3505 SANT_DAMP1_like 4.6e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3505 K11324 - gmx:100818926 719.153