Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3492 ATGGATTCTCGTTCACCACCTCCTCATATCAACATAGAACCTGAGTATTGTCCACAAGCTGTGTTTGAATGGTATCGCTTAACAGGATTAAAAGATCGTAAAGAAAGCTTTAGAAGAAAGGATTTGGCTTTGAAAGCAAAACAACATCTTTTTTATTTGGGTTGGAGGTTTTGGTATATTGACAAAAAGTGTAGGTGGGAATTGCGTTATACTTCTCCTAATGCCAAAAACTATACTACTCTTAGAAAAGCCTGCCATGTTTGCATTGAACAAGGAGGGTGTTCCCTCAAACACTCTTCAACCGCAGCACCAATTTCTTCGTCTCCATTAGAGTTGAAAAAGCGATCGAGAGAATCCCATGAAACAGCAGCAGCAACAATTTTTTCCTCTGCATTACAGTTGAAAAAACGACAGAGAAAATCCAAGGAAGCAGTAGCAAGAGCATTTACTTTGTCTGCATTACAGTCGAAGGAGCGACCGGGAGAATCCGAGGAAACAGCAGCAACATCAATTTATTTGCCTCCTTTACAGTCGAAAGAGCAACTGAGAAAATCCGAGGAAGCAGCAACAACAACAGCAATTTCTTCTTCTCCATTACAGTTGAAAGTGCAACCGAGAGAATCCGAGGAAGCAGTAGCTAGAGCATTTTCTTTGTCTCCATTACAGTCGAAAGAGAGACTGAAAGAATCCAAGGAAGAAGCAGCAGCATCAATTTATTCTTCTCAATTACATTTGAAAGAGCAACCCAGAGAATCTGAGGAGGAAGCAGAAGCAATAGCAATTCCTTCGGAATTTGATGAATCAACTTCTGATGAGGACTCTGAAGCCTCTAGTACAAGTTCTGAATCAACTTCTGATGAGGATTCTGAAACCTCTTGTTCCAGTTCTGTTAAAAAAGCTACGGTTACTATGGTATCAACAACAATGGAAAATGAGAATCATGTGAGTCAATCTGAACCAGAAGTTACAAATTCGGTGGGTAGTGGTAAAAAACTAAAGGTTTTAAAAACTATTAAAATGGAGAAGAATTTGGAGGGTTATGGTAGAAGAGGGAAAGTATTGAAGATGAGTATAATGAAGAAGAATTCAGAGGGTTTTGGTAAAAGAGGGAAGGTATTAAAGAGGGGAGGTATAAGGGAAAGTTATTCCATTGTTTCTTGGTTGATAGAGAATAAAGTTTTGGTTTCAGGAACTCATGTGTTCTGTCGTGGTAGTGAAAATATTGTCAAAAGAGGGAGTATATTTTCTGATGGTATAGTTTGTAACTGTTGTCGTGTTAATTTCACCGTCAGTGGATTTGAGGCTCATGCTGGTTGTACAAGACACAGACCATCCATTAGTATCTTGTTGGAAGACGGAAGGTCATTGTTTAAATGTCAAAGGGAAGCGCGTGATCAAAAGGGGAGTCATTGTATTGGGGAAGCAAATTCTGAAGCAAATAACGACAATGTTTGTTCTATTTGTGGCTTTGGAGGTGACTTAGTACTATGTGATCGATGTCCTTCTGCATTCCACCTTGGTTGTTTAGGTCTTGATCGAGTTCCAGATGGTGATTGGTTCTGTCCAACTTGTTGTTGCAAAATATGCTATCGACCCAAATGCAAACAAGAATGTGCAGATGGCAATGAAAACAATTTTCTTGTATGTGTACAATGTGAGCAAAAATTTCACTTTGGGTGTGTAAAGACTACAAGATTTGGATCTAGTCACACAGAGAGCAATATTAAAAAGAAGAATTGGTTTTGCAGTGTAGTTTGTGGGAACATGTTCTTATGTCTAAAGAAGCTATTGGGGAAACCAATTAAGGTTGCAGATAATATAAATTGGACATTGTTGAAGAATGTGAGTAGTGACGATGATGGTGGAGATTTTACTTCTAATGAGTTTAGTCAAGAGAAGCATAAGTTGAATGCAGCTCTTGGTGTATTGTATGAGGGTTTTAATCCAACTATTGATGCTTTATCTGGAAGAGAGTTGATTAAAGATCTTGTTTTTAGTAGAGATTCAGAACATAAACGCTTGAACTTCCGTGGTTTCTATACTGTGATTTTGGAGAAAATGGGGGAAGTGATTTCGGTGGCAACTATAAGGATTTTTGGTCAAAAGGTTGCAGAGATAGTTTTTGTGGCTACCAAGGAGCAACATCGAGGACGAGGAATGTGTCGTTTGTTGATGGATGAGCTTGAGGAACAGTTGACTCGCTTAGGAGTAGGAAGATTGGTTTTGCATTCATCTGAAGATGCTATAAACACTTGGACAAAATCGTTTGGTTTTGCTAGGATGACGAGTGAAGACAAGTGTAAACTTATTGATAATACTTTCTTAGAATTTCACAACTCTATCATGTGCCTTAAACCACTGAATATACCTATATGGCCTCGCATTGCTTGA 2391 0.3864 MDSRSPPPHINIEPEYCPQAVFEWYRLTGLKDRKESFRRKDLALKAKQHLFYLGWRFWYIDKKCRWELRYTSPNAKNYTTLRKACHVCIEQGGCSLKHSSTAAPISSSPLELKKRSRESHETAAATIFSSALQLKKRQRKSKEAVARAFTLSALQSKERPGESEETAATSIYLPPLQSKEQLRKSEEAATTTAISSSPLQLKVQPRESEEAVARAFSLSPLQSKERLKESKEEAAASIYSSQLHLKEQPRESEEEAEAIAIPSEFDESTSDEDSEASSTSSESTSDEDSETSCSSSVKKATVTMVSTTMENENHVSQSEPEVTNSVGSGKKLKVLKTIKMEKNLEGYGRRGKVLKMSIMKKNSEGFGKRGKVLKRGGIRESYSIVSWLIENKVLVSGTHVFCRGSENIVKRGSIFSDGIVCNCCRVNFTVSGFEAHAGCTRHRPSISILLEDGRSLFKCQREARDQKGSHCIGEANSEANNDNVCSICGFGGDLVLCDRCPSAFHLGCLGLDRVPDGDWFCPTCCCKICYRPKCKQECADGNENNFLVCVQCEQKFHFGCVKTTRFGSSHTESNIKKKNWFCSVVCGNMFLCLKKLLGKPIKVADNINWTLLKNVSSDDDGGDFTSNEFSQEKHKLNAALGVLYEGFNPTIDALSGRELIKDLVFSRDSEHKRLNFRGFYTVILEKMGEVISVATIRIFGQKVAEIVFVATKEQHRGRGMCRLLMDELEEQLTRLGVGRLVLHSSEDAINTWTKSFGFARMTSEDKCKLIDNTFLEFHNSIMCLKPLNIPIWPRIA* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3492 796 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 642 790 IPR000182 GO:0016407
Mtr7g3492 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 473 540 IPR013083 -
Mtr7g3492 796 Pfam Acetyltransferase (GNAT) family 667 758 IPR000182 GO:0016407
Mtr7g3492 796 CDD NAT_SF 682 743 - -
Mtr7g3492 796 ProSiteProfiles Zinc finger PHD-type profile. 482 527 IPR019787 -
Mtr7g3492 796 Pfam Tify domain binding domain 412 463 IPR032308 -
Mtr7g3492 796 MobiDBLite consensus disorder prediction 155 176 - -
Mtr7g3492 796 MobiDBLite consensus disorder prediction 240 299 - -
Mtr7g3492 796 MobiDBLite consensus disorder prediction 274 299 - -
Mtr7g3492 796 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 9 790 - -
Mtr7g3492 796 SUPERFAMILY FYVE/PHD zinc finger 473 535 IPR011011 -
Mtr7g3492 796 SMART PHD_3 484 525 IPR001965 -
Mtr7g3492 796 SMART PHD_3 533 586 IPR001965 -
Mtr7g3492 796 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 674 771 IPR016181 -
Mtr7g3492 796 Pfam PHD-finger 484 526 IPR019787 -
Mtr7g3492 796 MobiDBLite consensus disorder prediction 258 273 - -
Mtr7g3492 796 Gene3D - 650 771 - -
Mtr7g3492 796 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3492 Mtr-Chr7 51885540 51887930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3492 383 735 PHD Transcription Factor Family AT5G58610 41.828 4.93e-88 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr7g3492 Acetyltransf_1 1.1e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3492 - - mtr:MTR_3g103110 865.144