Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3489 ATGGACAGTAATGCCTCCCCCAAACTTGAGTCAGAGACATCTTTAGAGCTCAAACCAGAATCTCAAGTATCTAAGAAACGGAAAATGGTTGAGAAAACGGTTGTGACTGTGAGGATTGGAGAGAATGTTAGCAAGGTGAAGAATGAAGGACTTCCTTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGCTCTCCATACCCAAGGGGATATTATAGGTGCAGCACATGCAAGGGCTGTTCAGCCAAAAAACAAGTAGAGAGAAGCAGCACAGATGCTTCATTGCTCATCATCACCTATACTTCAACACATAACCATCCAGATCCCACTGCCCTCTCCTCCACCACAAATTTAGCTCAACAACCAAAAGAATCCAAAACCGAAACAACCAAAGATCTCCCAGTTACTTCTAAGGAAGAAAACCAAGAACAAAAACAGGTAGAAGAGGAGATTAACAGTAATAAGAGCACTGTGAGTAGTAGTGATCAAGTTACAAATGAAGAAAATTTTCATTACTTACAATCTACAACACACTGCTCAGAGGACATCATTATAGACCAAGAAGATCCTTTCAAACTAAATATAGAAAAAAGCCATATTGACAAAATAGATCTTCTCTTAGAGGAAGAGCCACTCTGCTATGCACAGTTAAAGAATATGTCAGCATCTAAATCAGAAGAATTTGATTTTTTCGATGAGCTTGAGGAGTTACCTATGTCTTCATCTATTTTACACTTTACGAGGAGCATTTTTTCTGATGAAAGGATTCCTGTTGCCCCTTCTTGA 798 0.3897 MDSNASPKLESETSLELKPESQVSKKRKMVEKTVVTVRIGENVSKVKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTCKGCSAKKQVERSSTDASLLIITYTSTHNHPDPTALSSTTNLAQQPKESKTETTKDLPVTSKEENQEQKQVEEEINSNKSTVSSSDQVTNEENFHYLQSTTHCSEDIIIDQEDPFKLNIEKSHIDKIDLLLEEEPLCYAQLKNMSASKSEEFDFFDELEELPMSSSILHFTRSIFSDERIPVAPS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3489 265 MobiDBLite consensus disorder prediction 107 169 - -
Mtr7g3489 265 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3489 265 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 250 IPR044810 GO:0003700
Mtr7g3489 265 SUPERFAMILY WRKY DNA-binding domain 48 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3489 265 MobiDBLite consensus disorder prediction 13 28 - -
Mtr7g3489 265 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3489 265 MobiDBLite consensus disorder prediction 1 28 - -
Mtr7g3489 265 MobiDBLite consensus disorder prediction 107 128 - -
Mtr7g3489 265 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 13 250 - -
Mtr7g3489 265 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3489 265 MobiDBLite consensus disorder prediction 155 169 - -
Mtr7g3489 265 MobiDBLite consensus disorder prediction 129 154 - -
Mtr7g3489 265 Gene3D WRKY domain 38 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3489 Mtr-Chr7 51864833 51867152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3489 1 114 WRKY Transcription Factor Family AT2G34830 54.783 1.52e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr7g3489 WRKY 9.1e-24 CL0274