Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3487 ATGGAAATTGACCATTTTTCTTCCACTCATGACTTTGTAGAAGAAGTTGTGTTCCAAGACAAACAACATAGTTTTTCTGGAATAATTAGCAATCCTCTTCCAAAGGAGAATGATCAACTACCCAACATGTTCAACAACAACCAAAATCATCATCATCATCAACAACAACAAGAATTCGAAGTTTGTAATTTCATGTCATTATTAGAAGATATCAATATCAACTTAGAAACTGATCAACAAAAGAATCTTCACCACAAAGTTCCAATTCCAAAACCTTTAGAAAACAATATTCAGAAGATGCCACAATATCTATCATCCTTGGAGATTCTGAGAAATCATGGAAGCAGATTCAACAGGAATAACACAATCAATACTAAAGCTTCTTCAAATTTGGAACAACATCAAAAGATGTCAACAGAAGGAATAATAAGAGTAGCTGGAGCAAGGTATACTCAATATTCTTCTTCTCATTGGAGTGATAATTTTTGCATCCAAACACACCCTTATGGATTTGACCTTAATGGTTTATCTGAGGAAGAAAATAGAGACATTGAACTAGCACAGTTTCTCTATGTAGCAGCTGAAAGAGTAAGTTTGCAACAATATGAACGTGCAAAAAAATTACTTTTATATTGTCAATGGAATTCTTCTATCACAGGAAATTGTGTTCAAAGAATTGTCTTTCATTTTGCACAAGCACTTCAAGAGAGAATAGTGAAAGAAACTGGAAGAGTGGTTAAAGGGTCAGATAAAAATGAAGAAAGTGAGTTAATTGAGAAGATGGGTTCAAAAAAAGCACTTATGTGTCATCAAAAACTTCCTTTTAATCAAGTTATGCAATTTACTGGAATACAAGCTATAGTTGAACATGTTAAGTTTGAGACTAAAATTCATCTAATAGATTTTGATATAAAAAGTGGGGTCCAGTGCATAGCTTTGATGCAAGCACTTTCTGAGAGACAGGATTGCATAGTTGAAATTTTTAAGCTAAGTGCTATTGGACTTAATACATGCAAGAACAAAATTGAAGAAACTGGCAAAAATTTAGCTAGTTTTGCTGAATCATTGAACTTGCCCTTTTTATATAAACCTGTTTTAGTAGAAGATATGTTGGAAATCAAAGAGGATGATTTTGAAATTGAAAAGGATGAAGCTGTTGCTGTTTATTCTCCATATTTTCTAAGGACTTTAATATCAAAGCAAGATTGTATGGAAAATTTGATGAGGGTTTTGAGAGATATCAAACCATGTATAATGATAGTACTTGAAACTGAAGCAAGTCTTAATTCGCAGTCTTTTGTGAACCGATTCGTTGAAGCGTTGTTCTTCTACTCGGCTTTTTTCGATATGGCTGAAACATGTATGAGCGAGGAGGATGAGTGTAGAATGATAACAGAAGGAATACTATCTGTAGGGTTAAGAAATATTGTTGCGTCAGAAGGTAGAGAAAGGACTGTTAGAAATGTGAAAATTGATGTTTGGAGAAGATTCTTTGCAAGGTATAGAATGGTGGAAACTAGGTTTAGTGAGGCATGTGTTTACCAAGCTGAATTGGTGAGTAAAGAGTTTGATGATGGGAAATTTTGCGATGTGGAAAAGAATGGGAAGTGTTTGATATTGGGATGGAAGGGGACTCCAATGTATTCAATCTCAGCTTGGAGGTTTCTTTGA 1671 0.3405 MEIDHFSSTHDFVEEVVFQDKQHSFSGIISNPLPKENDQLPNMFNNNQNHHHHQQQQEFEVCNFMSLLEDININLETDQQKNLHHKVPIPKPLENNIQKMPQYLSSLEILRNHGSRFNRNNTINTKASSNLEQHQKMSTEGIIRVAGARYTQYSSSHWSDNFCIQTHPYGFDLNGLSEEENRDIELAQFLYVAAERVSLQQYERAKKLLLYCQWNSSITGNCVQRIVFHFAQALQERIVKETGRVVKGSDKNEESELIEKMGSKKALMCHQKLPFNQVMQFTGIQAIVEHVKFETKIHLIDFDIKSGVQCIALMQALSERQDCIVEIFKLSAIGLNTCKNKIEETGKNLASFAESLNLPFLYKPVLVEDMLEIKEDDFEIEKDEAVAVYSPYFLRTLISKQDCMENLMRVLRDIKPCIMIVLETEASLNSQSFVNRFVEALFFYSAFFDMAETCMSEEDECRMITEGILSVGLRNIVASEGRERTVRNVKIDVWRRFFARYRMVETRFSEACVYQAELVSKEFDDGKFCDVEKNGKCLILGWKGTPMYSISAWRFL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3487 556 ProSiteProfiles GRAS family profile. 177 554 IPR005202 -
Mtr7g3487 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 554 IPR005202 -
Mtr7g3487 556 Pfam GRAS domain family 187 554 IPR005202 -
Mtr7g3487 556 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 41 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3487 Mtr-Chr7 51852355 51854025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3487 176 555 GRAS Transcription Factor Family AT2G01570 26.562 1.45e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr7g3487 GRAS 3.2e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3487 - - gmx:100791952 636.721